Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Heterodera schachtii Gland Cell Sequencing

ABSTRACT: Heterodera schachtii Gland Cell Sequencing

PROVIDER: PRJEB71499 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR12410740_1.fastq.gz	Fastqsanger.gz
	ERR12410740_2.fastq.gz	Fastqsanger.gz
	ERR12410741_1.fastq.gz	Fastqsanger.gz
	ERR12410741_2.fastq.gz	Fastqsanger.gz
	ERR12410742_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 31

Similar Datasets

Heterodera schachtii SUGR sequencing

Project description:Heterodera schachtii SUGR sequencing

| PRJEB71637 | ENA

Heterodera schachtii

Project description:Heterodera schachtii Transcriptome

| PRJNA506892 | ENA

Heterodera schachtii

Project description:Heterodera schachtii overview

| PRJNA234307 | ENA

DNA sequencing of Heterodera schachtii IRS (Woensdrecht) population

Project description:In order to polish a long-read genome assembly, short-read illumina data was obtained from Heterodera schachtii cysts (Woensdrecht population from IRS, the Netherlands). Cysts where obtained from infected plant material. Nematodes were cleaned using a sucrose gradient centrifugation step. Thereafter DNA was extracted and used for library preparation and sequencing by Illumina NextSeq500.

2023-11-03 | E-MTAB-13472 | biostudies-arrayexpress

Heterodera schachtii

Project description:Transacriptome sequencing of Heterodera schachtii esophageal glands

| PRJNA530658 | ENA

Heterodera schachtii

Project description:Heterodera schachtii Transcriptome or Gene expression

| PRJNA234080 | ENA

Wolbachia endosymbiont of Heterodera schachtii isolate:wHet from Heterodera schachtii

Project description:Wolbachia endosymbiont of Heterodera schachtii isolate:wHet from Heterodera schachtii Genome sequencing

| PRJNA1148971 | ENA

RNA tomography reveals spatial gene expression maps of Arabidopsis thaliana roots infected with Heterodera schachtii

Project description:Plant-parastic nematodes cause substantial crop losses worldwide. The sedentary endoparasite nematode Heterodera schachtii induces specialized feeding structures in host roots. The molecular mechanisms underlying feeding structure initiation and development remain poorly understood. High-resolution, spatially resolved transcriptomics is required to study localized gene expression patterns underlying feeding structure formation. Here, we introduce RNA tomography for plants, a powerful untargeted spatial transcriptomics technology that allows studying gene expression at cellular resolutions. We applied RNA tomography to Arabidopsis thaliana roots infected with H. schachtii at 1 and 2 days post inoculation. Our findings provide novel insights into early nematode parasitism.

2025-09-18 | GSE297648 | GEO

Heterodera schachtii isolate:Bonn

Project description:Heterodera schachtii isolate:Bonn Genome sequencing and assembly

| PRJNA722882 | ENA

Heterodera schachtii strain:IRS

Project description:Heterodera schachtii strain:IRS Genome sequencing and assembly

| PRJNA767548 | ENA