Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing analyses of human liver cancer cell line HepG2 treated with control shRNA and YTHDC1 knockdown shRNA

ABSTRACT: RNA sequencing analyses of human liver cancer cell line HepG2 treated with control shRNA and YTHDC1 knockdown shRNA

PROVIDER: PRJEB76853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA sequencing analyses of human liver cancer cell line HepG2 treated with control shRNA and YTHDC1 knockdown shRNA

Project description:YTHDC1 is one of m6A reader proteins exerting multifaceted effects on determining the fate of m6A RNA within the nucleus.To understand how YTHDC1 contributes to liver cancer progression, we conducted RNA-seq assay in shCtrl and shDC1 HepG2 cells and aimed to identified YTHDC1-responsive genes.

2025-03-25 | E-MTAB-14193 | biostudies-arrayexpress

MeRIP sequencing analyses of human liver cancer cell line HepG2

Project description:YTHDC1 is one of m6A reader proteins exerting multifaceted effects on determining the fate of m6A RNA within the nucleus and highly expressed in liver cancer cells.To understand how YTHDC1 contributes to liver cancer progression, we conducted MeRIP-seq assay in HepG2 cells and aimed to identified YTHDC1 target transcripts.

2025-03-25 | E-MTAB-14194 | biostudies-arrayexpress

HepG2 TP53BP2-knockdown

Project description:HepG2 TP53BP2-knockdown

| PRJNA854656 | ENA

HepG2 HepAD38 TP53BP2-knockdown

Project description:HepG2 HepAD38 TP53BP2-knockdown

| PRJNA854649 | ENA

E14 cells knockdown with shRNA

Project description:E14 cells knockdown with shRNA

| PRJNA972667 | ENA

shRNA RNA-seq from HepG2 (ENCSR927SLP)

Project description:shRNA knockdown against LIN28B in HepG2 cells followed by RNA-seq. (LIN28B_BGHLV18) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88648 | GEO

shRNA RNA-seq from HepG2 (ENCSR067AUG)

Project description:shRNA knockdown against DDX59 in HepG2 cells followed by RNA-seq. (DDX59_BGHLV18) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88000 | GEO

shRNA RNA-seq from HepG2 (ENCSR347ZHQ)

Project description:shRNA knockdown against XRN2 in HepG2 cells followed by RNA-seq. (XRN2_BGHLV17) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88209 | GEO

shRNA RNA-seq from HepG2 (ENCSR667RIA)

Project description:shRNA knockdown against RPS2 in HepG2 cells followed by RNA-seq. (RPS2_BGHLV18) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88447 | GEO

shRNA RNA-seq from HepG2 (ENCSR547NWD)

Project description:shRNA knockdown against AARS in HepG2 cells followed by RNA-seq. (AARS_BGHLV17) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88352 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data