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OdNipErec

ABSTRACT: Niphates erecta (lavander rope sponge)

PROVIDER: PRJEB86356 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
		Other
	odNipErec3.Hyphomonadaceae_1.1.primary.fa.gz	Other
	odNipErec3.metagenome.1.primary.fa.gz	Other
	odNipErec3.Paracoccaceae_1.1.primary.fa.gz	Other
	odNipErec3.Sansalvadorimonas_sp_1.1.primary.fa.gz	Other

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1 - 5 of 14

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odNipErec3.metagenome

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Phosphosite mapping on A. thaliana ERECTA

Project description:Description: This entry contains 6 raw files. Experiment setup: Immunoaffinity purification of YFP-ERECTA from Arabidopsis thaliana. Two independent experiments conducted in 2013: first experiment has one sample and second experiment has two sample replicates. For each sample, purified YFP-ERECTA was separately digested with trypsin and chymotrypsin. LC-MS/MS analysis on a Thermo LTQ-Velos Orbitrap. MS in the orbitrap and MS/MS in the ion trap. Torii's lab provided purified YFP-ERECTA. Villen lab conducted proteomic sample preparation and MS analysis to identify phosphosites. Full search results provided (unfiltered). raw file sample; 07090.raw YFP-ERECTA trypsin; 07091.raw YFP-ERECTA chymotrypsin; 07462.raw YFP-ERECTA trypsin; 07463.raw YFP-ERECTA chymotrypsin; 07465.raw YFP-ERECTA trypsin; 07466.raw YFP-ERECTA chymotrypsin;

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Human prefrontal cortex Ribominus RNA sequencing

Project description:miRNA sponge, a special class of miRNA target, has been emerging as a pivotal player in miRNA mediated regulatory network. Currently, the identified miRNA sponge genes mostly act on sequestering conserved miRNAs (e.g. miR-7, miR-145), however, the existence, potential function and evolutionary process of miRNA sponge genes for species-specific miRNA, especially for human specific miRNA, are largely unknown. In this study, we conducted a systematic analysis including sponge gene identification and subsequent function and evolutionary analyses for an authentic human-specific miRNA, miR-941.

2019-01-01 | GSE93708 | GEO

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