Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Metagenome assembly of PRJNA822508 data set (Metagenomic exploration of Surface waters from the Andaman and Nicobar Islands, India.)

PROVIDER: PRJEB86619 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18577430.contigs.fa.gz	Other
	SRR18577436.contigs.fa.gz	Other
	SRR18577427.contigs.fa.gz	Other
	SRR18577428.contigs.fa.gz	Other
	SRR18577429.contigs.fa.gz	Other

Items per page:

1 - 5 of 6

Similar Datasets

Project description:Metagenomic exploration of Surface waters from the Andaman and Nicobar Islands, India.

| PRJNA822508 | ENA

Fangs in the ghats: preclinical insights into the medical importance of endemic pit vipers from the Western Ghats

Project description:The socioeconomic burden of snakebite in India is largely attributed to the ‘big four’ snakes, completely neglecting the considerable impact of envenoming by many other snake species. Bites from the so-called ‘neglected many’ are often treated with a polyvalent antivenom that is manufactured against the ‘big four’ snakes - a strategy that has been widely documented to fail. Yet, specific antivenoms are not commercially manufactured against these snakes. While the medical importance of various species of cobras, saw-scaled vipers, and kraits is very well-known, the clinical impact of pit vipers from the rainforests of the Western Ghats, northeastern India, and Andaman and Nicobar islands has remained elusive. Amongst the 90+ species of snakes found in the Western Ghats, the hump-nosed (Hypnale hypnale), Malabar (Craspedocephalus malabaricus) and bamboo (Craspedocephalus gramineus) pit vipers can potentially inflict clinically severe envenoming in humans. To evaluate the severity of toxicity inflicted by these snakes, we characterised their venom composition, biochemical and pharmacological activities, and toxicity- and morbidity-inducing potentials. Our findings highlight the therapeutic inadequacies of the generic Indian and Hypnale-specific Sri Lankan polyvalent antivenoms in neutralising morbidity and mortality resulting from pit viper envenomings and underscore the need for a regional antivenom therapy in India.

2023-07-20 | PXD039139 | Pride

EXPLORATION OF MICROBIAL DIVERSITY IN COASTAL SURFACE WATERS: A METAGENOMIC APPROACH

Project description:EXPLORATION OF MICROBIAL DIVERSITY IN COASTAL SURFACE WATERS: A METAGENOMIC APPROACH

| PRJEB80147 | ENA

Project description:Microbial diversity study on samples from Andaman & Nicobar Island

| PRJNA430020 | ENA

Project description:Environmental isolation of Candida auris from the coastal wetlands of Andaman Islands, India

| PRJNA679832 | ENA

Project description:First Report of Ocular Microbiome associated Diversity with Acute Keratoconjunctivitis in Andaman Islands, India.

| PRJNA1243478 | ENA

Project description:Bacteria isolated from deep-sea sediment of Andaman and Nicobar Island

| PRJNA1253390 | ENA

Community composition of nitrous oxide reducing bacteria investigated using a functional gene microarray

Project description:The diversity and environmental distribution of the nosZ gene, which encodes the enzyme responsible for the consumption of nitrous oxide, was investigated in marine and terrestrial environments using a functional gene microarray. The microbial communities represented by the nosZ gene probes showed strong biogeographical separation, with communities from surface ocean waters and agricultural soils significantly different from each other and from those in oceanic oxygen minimum zones. Atypical nosZ genes, usually associated with incomplete denitrification pathways, were detected in all the environments, including surface ocean waters. The abundance of nosZ genes, as estimated by quantitative PCR, was highest in the agricultural soils and lowest in surface ocean waters.

2018-10-19 | GSE121473 | GEO

aquatic metagenome

Project description:surface waters Metagenome

| PRJNA380578 | ENA

Project description:WGS of Megapodius nicobariensis abbotti from Great Nicobar, India

| PRJNA1127442 | ENA