Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PySymDtwo

ABSTRACT: Symbiodinium sp. D2, genomic and transcriptomic data

PROVIDER: PRJEB87724 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR14792884_1.fastq.gz	Fastqsanger.gz
	ERR14792884_2.fastq.gz	Fastqsanger.gz
	ERR14792885_1.fastq.gz	Fastqsanger.gz
	ERR14792885_2.fastq.gz	Fastqsanger.gz
	ERR14835553.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

pySymDtwo

Project description:Symbiodinium sp. D2

| PRJEB87725 | ENA

pySymSpeb

Project description:Symbiodinium sp. 221-229, genomic and transcriptomic data

| PRJEB87262 | ENA

pySymSpec

Project description:Symbiodinium sp. 240-249, genomic and transcriptomic data

| PRJEB76746 | ENA

pySymSped

Project description:Symbiodinium sp. 259-268, genomic and transcriptomic data

| PRJEB76748 | ENA

The host transcriptome remains unaltered during the establishment of coral-algal symbioses

Project description:Coral reefs are based on the symbiotic relationship between corals and photosynthetic dinoflagellates of the genus Symbiodinium. We followed gene expression of coral larvae of Acropora palmata and Montastraea faveolata after exposure to Symbiodinium strains that differed in their ability to establish symbioses. We show that the coral host transcriptome remains almost unchanged during infection by competent symbionts, but is massively altered by symbionts that fail to establish symbioses. Our data suggest that successful coral-algal symbioses depend mainly on the symbionts' ability to enter the host in a stealth manner rather than a more active response from the coral host. Acropora palmata Samples: Three biological replicates of pooled larvae from each species and condition (i.e. untreated control, inoculated with competent Symbiodinium strain, inoculated with incompetent Symbiodinium strain) for both time points were hybridized against a pooled reference. Pooled references were constructed by combining equal amounts of aRNA from all control samples from A. palmata. References were labeled with Cy3, samples with Cy5. Montastraea faveolata Samples: Three biological replicates of pooled larvae from each species and condition (i.e. untreated control, inoculated with competent Symbiodinium strain, inoculated with incompetent Symbiodinium strain) for both time points were hybridized against a pooled reference. Pooled references were constructed by combining equal amounts of aRNA from all control samples from M. faveolata. References were labeled with Cy3, samples with Cy5. Symbiodinium sp. CassKB8: competent strain Symbiodinium sp. EL1: incompetent strain Symbiodinium sp. Mf1.05b: competent strain

2010-06-20 | E-GEOD-14923 | biostudies-arrayexpress

pySymPseu

Project description:Symbiodinium pseudominutum, genomic and transcriptomic data

| PRJEB87726 | ENA

pySymNata

Project description:Symbiodinium natans, genomic and transcriptomic data

| PRJEB87442 | ENA

pySymPilo

Project description:Symbiodinium pilosum, genomic and transcriptomic data

| PRJEB66062 | ENA

pySymTrid

Project description:Symbiodinium tridacnidarum, genomic and transcriptomic data