Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ninja-seq

ABSTRACT: ninja-seq

PROVIDER: PRJEB88528 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR14933512.fastq.gz	Fastqsanger.gz
	ERR14933513.fastq.gz	Fastqsanger.gz
	ERR14933514.fastq.gz	Fastqsanger.gz
	ERR14933515.fastq.gz	Fastqsanger.gz
	ERR14997955.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Root transcriptome of ninja-1

2015-05-28 | GSE65840 | GEO

Root transcriptome of ninja-1

Project description:A major role of NINJA is to repress root jasmonate signalling and allow normal cell elongation. To further characterize the transcriptional changes occurring in the root in the absence of a NINJA-dependent repression mechanism, we conducted a microarray analysis of ninja-1 versus WT roots. Root transcriptome of Col-0 (WT) versus ninja-1, both carrying the JAZ10pro-GUSPlus (JGP) reporter, grown in basal aseptic conditions. Biological replicates: 3 for the WT control and 3 for the ninja-1 mutant.

2015-05-28 | E-GEOD-65840 | biostudies-arrayexpress

NINJA connects JAZ proteins to the co-repressor TOPLESS

Project description:NINJA (At4g28910) and TOPLESS proteins function as negative regulators of jasmonate responses. Our results point to TPL proteins as general co-repressors that affect multiple signalling pathways through the interaction with specific adaptor proteins. This new insight reveals how stress- and growth-related signalling cascades use common molecular mechanisms to regulate gene expression in plants. Two-condition experiment, Col-0 vs. plants silencing NINJA (RNAi-NINJA) and both Col-0 vs RNAi NINJA treated with coronatine . Biological replicates: 4 control replicates untreated , 4 RNAi NINJA untreated replicates, 4 control treated replicates and 4 RNAi NINJA treated replicates

2010-04-05 | E-GEOD-19455 | biostudies-arrayexpress

RNA-seq analysis of frs7;frs12;ninja-1 triple loss-of-function seedlings

Project description:Gene expression analysis of Arabidopsis thaliana frs7;frs12;ninja-1triple mutant line in comparison with control lines (frs7;frs12, ninja-1 and Col0).

2020-04-27 | E-MTAB-7402 | biostudies-arrayexpress

NINJA connects JAZ proteins to the co-repressor TOPLESS

2010-04-05 | GSE19455 | GEO

RNA-seq analysis of frs7 frs12 ninja-1 triple loss-of-function seedlings

Project description:RNA-seq analysis of frs7 frs12 ninja-1 triple loss-of-function seedlings

| PRJEB29717 | ENA

Grad-seq Enterococcus faecalis and faecium

Project description:Grad-seq in Enterococcus faecalis V583 and Enterococcus faecium AUS004.

2022-11-28 | PXD031577 | Pride

Grad-seq Clostridium difficile 630

Project description:Grad-seq in Clostridium difficile 630. Cell lysate is analyzed in a gradient and fractionated into 21 fractions which are analysed for proteins by MS and for transcripts by RNA-sequencing.

2021-05-12 | PXD022525 | Pride

Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS and NINJA repressor proteins to reprogram plant jasmonate signaling.

Project description:Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS and NINJA repressor proteins to reprogram plant jasmonate signaling.

| PRJEB57826 | ENA

Proteome data for CAT-seq and synchronous labeling

Project description:RAW proteome data for CAT-seq and synchronous labeling

| PXD065542 |