Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome sequencing of Neurospora discreta PS4B from North America and Europe

ABSTRACT: Neurospora discreta PS4B from North America and Europe

PROVIDER: PRJEB89220 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR14939223_1.fastq.gz	Fastqsanger.gz
	ERR14939223_2.fastq.gz	Fastqsanger.gz
	ERR14939224_1.fastq.gz	Fastqsanger.gz
	ERR14939224_2.fastq.gz	Fastqsanger.gz
	ERR14939225_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 112

Similar Datasets

A Metagenomics Analysis of Pandemic 2009 H1N1 Infection in Patients in North America

Project description:The Virochip microarray (version 4.0) was used to detect viruses in patients from North America with unexplained influenza-like illness at the onset of the 2009 H1N1 pandemic.

2010-11-01 | GSE24034 | GEO

A Metagenomics Analysis of Pandemic 2009 H1N1 Infection in Patients in North America

Project description:The Virochip microarray (version 4.0) was used to detect viruses in patients from North America with unexplained influenza-like illness at the onset of the 2009 H1N1 pandemic. We used metagenomics-based technologies (the Virochip microarray) and deep sequencing to analyze nasal swab samples from individuals with 2009 H1N1 infection. This Series includes the Virochip microarray data only.

2010-11-01 | E-GEOD-24034 | biostudies-arrayexpress

Early Ileostomy Closure for Rectal Cancer Patients in North America

Project description:Our preliminary work demonstrates that there is buy-in from both patients and surgeons with regards to early ileostomy closure (EIC) for select rectal cancer patients undergoing restorative proctectomy (RP) and diverting loop ileostomy (DLI). The feedback from leaders in Europe further supports the need for a large scale randomized-controlled trial (RCT) on this subject in North America. Should the results of such a study be favourable, we believe it could support a change in practice that would be beneficial to patients and the health care system alike. Furthermore, our work will help identify which patients and practices are suitable for EIC. The goal of our project is to determine whether EIC in rectal cancer patients undergoing RP with a DLI is safe, feasible and beneficial in a North American population. Specifically, our primary objective is to compare the severity of complications between patients undergoing EIC versus traditional (late) closure. Our secondary objectives include assessing the difference in quality of life (QoL), early and late bowel function, and cost of care between these two groups.

| 2388367 | ecrin-mdr-crc

Candidatus Symbiopectobacterium sp. 'North America'

Project description:Candidatus Symbiopectobacterium sp. 'North America' (SyHa):How1 (Howardula aoronymphium) Genome sequencing

| PRJNA415854 | ENA

Expression profiling of the three clonotypic lineages of Toxoplasma gondii

Project description:Expression profiling of the three clonotypic lineages dominating T. gondii populations in North America and Europe provides a first comprehensive view of the parasite transcriptome.

2010-02-02 | GSE20145 | GEO

Paleo-Eskimo genetic legacy across North America

Project description:Paleo-Eskimo genetic legacy across North America: sequence data

| PRJEB30575 | ENA

Neurospora discreta

Project description:Neurospora discreta overview

| PRJNA208105 | ENA

RNA sequencing for candidate gene identification for habitat specific clock varaition in natural ecotypes of Neurospora discreta

Project description:Purpose: The goal of the current study was to find the candidate genes responsible for the habita specific clock variation in N. discreta. Methods: We performed RNA-seq experiment using four strains ; African parent (FGSC8831), North American parent (FGSC 8578) and two representative progeny representing African clock phenotype (N309-89) and North American clock phenotype (N309-50). Results: We identified one candidate gene that meets our criteria; confirmed it's expression by qPCR and it's expression pattern is associated with parent genotype. Conclusions: Our approach using the expression profiles and SNP data of two parents and two representative progeny led us to identify a candidate gene for a complex clock adaptation phenotype.

2018-09-18 | GSE120053 | GEO

Neurospora discreta

Project description:Neurospora discreta Raw sequence reads

| PRJNA295117 | ENA

Neurospora discreta strain:ARPr12

Project description:Neurospora discreta ARPr12 Resequencing

| PRJNA459233 | ENA