Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

In vitro activity of the new fluoroketolide solithromycin (CEM-101) against a large collection of clinical Neisseria gonorrhoeae isolates and international reference strains, including those with high-level antimicrobial resistance: potential treatment option for gonorrhea?

ABSTRACT: WGS of Neisseria gonorrhoeae isolates tested against solithromycin

PROVIDER: PRJEB90450 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR15117251_1.fastq.gz	Fastqsanger.gz
	ERR15117251_2.fastq.gz	Fastqsanger.gz
	ERR15117252_1.fastq.gz	Fastqsanger.gz
	ERR15117252_2.fastq.gz	Fastqsanger.gz
	ERR15117253_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 78

Similar Datasets

Quantitative proteomics of the 2016 WHO Neisseria gonorrhoeae reference strains identifies vaccine candidates and antimicrobial resistance signatures.

Project description:Neisseria gonorrhoeae is the causative agent of gonorrhea, a leading sexually transmitted disease with severe complications on reproductive health. The U.S. Centers for Disease Control and Prevention has categorized the public health threat induced by N. gonorrhoeae as “urgent”, due to the ease of transmission and the fast emergence of multi-drug resistant strains. The need for development of vaccines and understanding the underlying factors leading to antibiotic resistance is of utmost importance. The proteomic profiles of the 14 WHO N. gonorrhoeae reference strains have been compared to the WHO F reference strain using a mass spectrometry with tandem mass tags (TMT) labeling to analyze the cell envelope and the cytoplasmic fractions extracted from each strain. Identifying novel vaccine candidates and proteomic signatures for antimicrobial resistance will further our understanding of N. gonorrhoeae proteotypes, in relationship to their respective genotypes and phenotypes, and provide deep insights that will impact the development of preventive and therapeutic tools to combat gonorrhea.

2018-12-19 | PXD008412 | Pride

MMRC aCGH reference collection

2011-01-26 | GSE26849 | GEO

MMRC expression reference collection

2011-01-20 | GSE26760 | GEO

MMRC expression and aCGH reference collection

Project description:This SuperSeries is composed of the SubSeries listed below.

2011-01-26 | GSE26863 | GEO

MMRC expression reference collection

Project description:The MMRC reference collection is a dataset of gene expression profiling, array comparative genomic hybridization, and re-sequencing created as a resource for the Multiple Myeloma research community. CD138 purified bone marrow cells from patients with newly diagnosed and relapsed Multiple Myeloma. This submission represents the transcriptome component of the study.

2011-01-20 | E-GEOD-26760 | biostudies-arrayexpress

MMRC aCGH reference collection

2011-01-26 | E-GEOD-26849 | biostudies-arrayexpress

SMiRL reference Strain Collection

Project description:SMiRL Reference Strain Collection

| PRJEB83698 | ENA

MMRC expression and aCGH reference collection

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2011-01-26 | E-GEOD-26863 | biostudies-arrayexpress

WHO Neisseria gonorrhoeae reference genomes

Project description:World Health Organization (WHO) Neisseria gonorrhoeae reference genomes

| PRJEB14020 | ENA

Transcription profiling of N. gonorrhoeae wild type strain grown in anaerobic conditions with sodium nitrate supplied in media compared to those grown in capnoaerobic conditions

Project description:Transcriptional profiling of N. gonorrhoeae grown in anaerobic conditions (with sodium nitrite supplied by adding 20% w/v solution to a final concentration of 5mM) compared to a control grown in capnoaerobic conditions (normal atmosphere +5% CO2)

2011-05-01 | E-MEXP-1660 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data