Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Cut and tag on H3K27ac and RNA polII of hybrid Ciona at different developmental stages

PROVIDER: PRJNA1002800 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25556568_1.fastq.gz	Fastqsanger.gz
	SRR25556568_2.fastq.gz	Fastqsanger.gz
	SRR25556569_1.fastq.gz	Fastqsanger.gz
	SRR25556569_2.fastq.gz	Fastqsanger.gz
	SRR25556570_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Project description:transcriptome of hybrid Ciona at different developmental stages

| PRJNA819937 | ENA

Ciona

Project description:single-cell RNA-seq of hybrid Ciona at different developmental stages

| PRJNA1003395 | ENA

Project description:single-cell RNA-seq of hybrid Ciona at different developmental stages

| PRJNA820327 | ENA

small RNA sequencing of two developmental stages of Ciona intestinalis

Project description:We report the comprehensive sequencing of small RNA libraries created from different developmental stages (larva and gastrula) of the basal chordate, Ciona intestinalis. These libraries were used for the identification of microRNAs in this organism. Sequencing of small RNA libraries from 2 stages of Ciona intestinalis.

2010-03-27 | E-GEOD-21078 | biostudies-arrayexpress

Role of Setd2 in regulatory T cells [Pol II CUT&Tag]

Project description:To determine the molecular regulation of Tregs by Setd2, spleen Tregs (CD3+CD4+Foxp3-YFP+) from Setd2-deficient and control Tregs were subjected to polII CUT&Tag analysis

2022-10-14 | GSE182839 | GEO

small RNA sequencing of two developmental stages of Ciona intestinalis

2010-03-27 | GSE21078 | GEO

Modeling pre-implantation development using totipotent blastomere-like stem cells [Cut&tag]

Project description:we have established TBLC-based differentiation systems to recapitulate the entire pre-implantation development Cleavage under target & tagmentation (CUT&Tag)-sequencing (CUT&Tag) for H3K4me3,H3K27ac,H3K9me3,RNA polymerase II(Pol2) and h3k27me3 in mPSC sand mTBLCs

2025-01-17 | GSE243923 | GEO

Quantitative Multi-Omics Atlas of the Model Chordate Ciona

Project description:We present a comprehensive proteome atlas of the model chordate Ciona, covering eight developmental stages and ~7k translated genes as well as a deep quantitative atlas of maternal proteins found in the Ciona egg.

2023-11-28 | PXD043619 | Pride

H3K27ac CUT&Tag iEC reprogramming

Project description:H3K27ac CUT&Tag iEC reprogramming

| PRJNA903808 | ENA

Genome-wide maps of H3K27ac in HDAC3 knockout bone marrow pDCs compared with control pDCs

Project description:Hdac3 is highly expressed in pDCs, and its deficiency led to substantially impaired development of pDCs, but not cDCs in bone marrow (BM) and spleen. Meanwhile,further investigation demonstrated that HDAC3 was required for the differentiation of pDC from progenitors at different differentiation stages in vitro. Cut & Tag analysis of H3K27ac level in HDAC3 deficient bone marrow pDCs compared with control pDCs, showed that H3K27ac level significantly increased on cDC related genes with PU.1 binding sites in HDAC3 knockout pDCs.

2022-05-27 | GSE197212 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data