Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Sequencing analysis of control and UXS1 KO A549 cells

ABSTRACT: RNA-Sequencing analysis of control and UXS1 KO A549 cells

PROVIDER: PRJNA1003410 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25569722_1.fastq.gz	Fastqsanger.gz
	SRR25569722_2.fastq.gz	Fastqsanger.gz
	SRR25569723_1.fastq.gz	Fastqsanger.gz
	SRR25569723_2.fastq.gz	Fastqsanger.gz
	SRR25569724_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

RNA-Sequencing analysis of control and UXS1 KO A549 cells

Project description:The mRNA profiles of A549 cell line were analyzed by RNA-sequencing under control and UXS1 KO conditions to identify gene expression changes induced by disruption of UXS1.

2023-10-27 | GSE240344 | GEO

RNA-seq of UHRF1 KO A549 cells vs. control A549 cells.

Project description:RNA-seq of UHRF1 KO A549 cells vs. control A549 cells.

| PRJNA1119458 | ENA

Bisulfite seq of UHRF1 KO A549 cells

Project description:Bisulfite seq of UHRF1 KO A549 cells

| PRJNA1119457 | ENA

miRNA array in the A549 Ago2-KO/HA-Ago2Wt, Ago2-KO/HA-Ago2KA, and Ago2-KO/HA-Ago2Δ (Dm) cells

Project description:We used miRNA microarrays to detail the miRNA content in A549 Ago2-KO/HA-Ago2Wt, Ago2-KO/HA-Ago2KA, and Ago2-KO/HA-Ago2Δ (Dm) cells

2024-04-18 | GSE255941 | GEO

RNA-seq analysis using A549 cells with TRIM22 knockdown and control A549 cells with or without ionizing radiation treatment.

Project description:In this study, we explored the role of TRIM22 in the response to ionizing radiation (IR) in A549 human lung cancer cells. TRIM22 was stably knocked down in A549 cells using shRNA, and four experimental groups were established: control A549 cells (non-irradiated), control A549 cells (irradiated), TRIM22 knockdown A549 cells (non-irradiated), and TRIM22 knockdown A549 cells (irradiated). RNA sequencing (RNA-seq) was performed to identify gene expression changes associated with TRIM22 knockdown and irradiation. This dataset provides insights into the molecular mechanisms by which TRIM22 influences the cellular response to radiation and its potential impact on cancer therapy.

2025-01-01 | GSE277805 | GEO

RNA-seq analysis using A549 cells with FXR knockdown and control A549 cells with or without ionizing radiation treatment.

Project description:In this study, we explored the role of FXR in the response to ionizing radiation (IR) in A549 human lung cancer cells. FXR was stably knocked down in A549 cells using shRNA, and four experimental groups were established: control A549 cells (non-irradiated), control A549 cells (irradiated), FXR knockdown A549 cells (non-irradiated), and FXR knockdown A549 cells (irradiated). RNA sequencing (RNA-seq) was performed to identify gene expression changes associated with FXR knockdown and irradiation. This dataset provides insights into the molecular mechanisms by which FXR influences the cellular response to radiation and its potential impact on cancer therapy.

2024-10-31 | GSE278872 | GEO

RNA sequencing of NT control cells, Traf3 KO, and Traf3/p100 double KO cells

Project description:RNA sequencing of NT control cells, Traf3 KO, and Traf3/p100 double KO cells

| PRJNA616333 | ENA

RNA-seq of UHRF1 KO A549 cells vs. control A549 cells.

Project description:To investigate the gene expression signatures of ICAM-1 candidate negative regulator UHRF1, we generate the UHRF1 KO cells and profiled the transcriptome changes by paired-end RNA seq.

2025-01-03 | GSE268917 | GEO

Proteome of ATGL knock-out A549 cells compared to A549 wild type cells

Project description:Comparison of ATGL-KO and ATGL-WT A549 cell proteomes

2018-09-18 | PXD007223 | Pride

Transcriptomic expression of A549 CDK2 KO cells treated or untreated with palbociclib

Project description:Inducing senescence in cancer cells is emerging as a new therapeutic strategy. We tested the senescence induction of palbociclib in CDK2 KO cells, and profiled these for senescence associated gene signatures. This was a CRISPR generated CDK2 KO clone in A549 cells.

2022-03-03 | GSE197600 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data