Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNAseq of mice injected with poly(I:C)

PROVIDER: PRJNA1007416 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25704028.fastq.gz	Fastqsanger.gz
	SRR25704029.fastq.gz	Fastqsanger.gz
	SRR25704030.fastq.gz	Fastqsanger.gz
	SRR25704031.fastq.gz	Fastqsanger.gz
	SRR25704032.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Whole Genome Sequencing on OCIAML-22

Project description:Donor_OCIAML22_bulk: The donor (unsorted) that was used to generate OCI-AML22. OCI-AML22_bulk_1month_inVitro: The donor (unsorted) that was used to generate OCI-AML22 was expanded for 1 month in vitro, then sequenced. OCI-AML22_graft_CD34minus_WGS: The donor (unsorted) that was used to generate OCI-AML22 was expanded for 1 month in vitro, then injected in NSG-SGM3 mice. 21 weeks after injection, cells from 5 mice injected with 5 mice injected with 1475 cells per mice and 4 mice injected with 469 cells per mice were sorted. The human CD34- fraction was sequenced (CD45h+CD45m-7aad-annexinV-CD34-) OCI-AML22_graft_CD34positive_WGS: The donor (unsorted) that was used to generate OCI-AML22 was expanded for 1 month in vitro, then injected in NSG-SGM3 mice. 21 weeks after injection, cells from 5 mice injected with 5 mice injected with 1475 cells per mice and 4 mice injected with 469 cells per mice were sorted. The human CD34+ fraction was sequenced (CD45h+CD45m-7aad-annexinV-CD34+)

| EGAS00001006513 | EGA

Effect of Bmal1 depletion on gene expression in poly(I:C)-stimulated myeloid peritoneal cells.

Project description:To investigate the effect of Bmal1 on poly(I:C) response, we isolate mRNA from PBS or poly(I:C)-injected WT and myeloid Bmal1 KO mice. We then compare the poly(I:C)-induced transcriptomic change between WT and Bmal1 KO peritoneal myeloid cells.

2024-01-31 | GSE222759 | GEO

RNAseq Suv39h1 injected single embryo

Project description:RNAseq Suv39h1 injected single embryo

| PRJNA518908 | ENA

Deficiency of Autism Risk Factor Ash1l in Prefrontal Cortex Induces Genetic Aberrations, Synaptic Imbalance and Severe Seizures

Project description:We performed RNAseq experiments to examine genome-wide transcriptional changes in PFC of shRNA-ASH1L KD mice compared to GFP injected control mice.

2021-08-12 | GSE181819 | GEO

Autism risk gene KMT5B deficiency in prefrontal cortex induces synaptic dysfunction and social deficits via alterations of DNA repair and gene transcription

Project description:We performed RNAseq experiments to examine genome-wide transcriptional changes in PFC of shRNA-Kmt5b KD mice compared to GFP injected control mice.

2021-08-12 | GSE181807 | GEO

Transcriptional profile of Mouse liver after MitoCDNB application

Project description:To assess the effect of MitoCDNB on transcriptional profile of mouse liver tissue we injected mice with either vehicle (0.1 % ethanol) or 5 mg/kg of MitoCDNB. Liver was taken from both vehicle or MitoCDNB injected mice after 1 or 4 hours and the transcriptome assessed using Illumina RNASeq.

2019-04-03 | GSE117425 | GEO

A Convergent Mechanism of High Risk Factors ADNP and POGZ in Neurodevelopmental Disorders

Project description:We performed RNAseq experiments to examine genome-wide transcriptional changes in PFC of shRNA-Adnp and shRNA-Pogz KD mice compared to GFP injected controls mice.

2021-11-17 | GSE188865 | GEO

Neuroinflammatory astrocyte subtypes in the mouse brain [scRNAseq]

Project description:Single cell RNAseq of FACS-purified astrcoytes from saline- and LPS-injected Aldh1l1egfp mice at 24h and comparison male vs female

2021-06-03 | GSE148611 | GEO

Project description:RNA-Seq of Granzyme A proteolytic site mutant mice injected with Poly (I:C)

| PRJNA666748 | ENA

RNAseq data from FACS-sorted microglia from mouse brain from control mice (uninjected) or LPS-injected mice in the context of A20 knockout

Project description:Using RNAseq, we compared the mRNA profiles of microglia in wild type or microglia-specific A20 knockout mice. These mice were either untreated or intraperitoneally injected with LPS (3.5 mg/kg).

2018-07-03 | GSE97538 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data