Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MERSCOPE profiling of non-aneurysmal and aneurysmal human ascending aorta

ABSTRACT: MERSCOPE profiling of non-aneurysmal and aneurysmal human ascending aorta

PROVIDER: PRJNA1010377 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

MERSCOPE profiling of non-aneurysmal and aneurysmal human ascending aorta

Project description:Single-molecule level spatial distribution of MERFISH (Multiplexed error-robust fluorescence in situ hybridization) probes targeting 140 genes were analyzed on two control (non-aneurysmal) samples and three TAA samples with Thoracic aortic aneurysm (TAA).

2023-10-14 | GSE241870 | GEO

Changes in the ascending aorta proteome of cholesterol-fed rabbits

Project description:Here we undertook a proteomic investigation of ascending aorta from New Zealand White rabbits after 10 weeks on a high (2% w/w) cholesterol diet (HCD, n=5) or control diet (n=5) in order to profile the proteomic changes in response to the HCD. Histology confirmed intimal thickening in the HCD group and LC-MS/MS analysis of individually obtained ascending aorta extracts labelled with isobaric (iTRAQ) tags led to identification and quantitation of 453 unique proteins above the 1% false discovery rate threshold. Of 67 proteins showing significant differences in relative abundance (p<0.05), 62 were elevated and five decreased in ascending aorta from HCD-fed rabbits compared to controls. Six proteins were selected for validation using Multiple Reaction Monitoring which confirmed the iTRAQ results.

2018-06-21 | PXD002345 | Pride

ChIP-seq from ascending aorta (ENCSR894EKG)

Project description:ChIP-seq on human ascending aorta For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2017-10-25 | GSE106065 | GEO

snATAC-seq from ascending aorta (ENCSR411MLR).

Project description:snATAC-seq of human ascending aorta For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2026-05-26 | GSE333050 | GEO

snATAC-seq from ascending aorta (ENCSR808WCV).

2026-05-26 | GSE333110 | GEO

ChIP-seq from ascending aorta (ENCSR960MDF)

Project description:CTCF ChIP-seq on human ascending aorta For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2017-10-24 | GSE105925 | GEO

PRO-cap from ascending aorta (ENCSR384HWB)

Project description:A run-on assay that precisely maps the transcription start sites genome-wide with high sensitivity and specificity in Ascending aorta. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2026-02-28 | GSE322443 | GEO

Epigenome analysis of ascending aorta from normal, aortic dissection and bicuspid aortic valve patients

Project description:Genome wide DNA methylation profiling of ascending aorta tissue samples from normal, aortic dissection and bicuspid aortic valve patients with aortic dilation. The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across more than 450,000 CpGs in ascending aorta samples. Samples included 6 normal donors, 12 patients with aortic dissection and 6 patients with bicuspid aortic valve and dilated aorta.

2019-07-11 | GSE84274 | GEO

snATAC-seq from ascending aorta (ENCSR411MLR) [superseded by GSE333050]

2025-01-14 | GSE286702 | GEO

snATAC-seq from ascending aorta (ENCSR808WCV) [superseded by GSE333110]

2025-01-14 | GSE286823 | GEO