Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Comammox in Simulation reactor C and D

PROVIDER: PRJNA1010987 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25822090_1.fastq.gz	Fastqsanger.gz
	SRR25822090_2.fastq.gz	Fastqsanger.gz
	SRR25822091_1.fastq.gz	Fastqsanger.gz
	SRR25822091_2.fastq.gz	Fastqsanger.gz
	SRR25822092_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Project description:Comammox in Simulation reactor A and B

| PRJNA1010973 | ENA

Project description:Archaeon in Simulation reactor

| PRJNA1009249 | ENA

Project description:Archaeon in Simulation reactor C and D

| PRJNA1010985 | ENA

Project description:Comammox Enrichment Effects in Different Reactor Configurations

| PRJNA548497 | ENA

Growth of complete ammonia oxidizers on guanidine

Project description:The nitrogen rich compound guanidine occurs widely in nature and is used by microbes as a nitrogen source, but microorganisms that grow on guanidine have not yet been discovered. Here we show that complete ammonia-oxidizing microbes (comammox), but no other known nitrifiers, encode homologues of a guanidinase and that the comammox isolate Nitrospira inopinata grows on guanidine as sole source of energy and reductant. Proteomics, kinetic enzyme characterization, and the crystal structure of the N. inopinata guanidinase homologue demonstrated that it is a bona fide guanidinase. Transcription of comammox guanidinases was induced in wastewater treatment plant microbiomes upon incubation with guanidine, and guanidine degradation was detected in these systems. The discovery of guanidine as a selective growth substrate for comammox shows a unique niche of these globally important nitrifiers and offers new options for their isolation as well as for targeted manipulation of nitrifier communities.

2024-08-03 | PXD038826 | Pride

activated sludge metagenome

Project description:Comammox bacteria in a weakly acidic continuous flow membrane (CFM) reactor

| PRJNA928855 | ENA

Enrichment of comammox Nitrospira in a nitrifying reactor

Project description:Enrichment of comammox Nitrospira in a nitrifying reactor Raw sequence reads

| PRJNA1240912 | ENA

Project description:comammox

| PRJNA578955 | ENA

Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea

Project description:We report the effect of addition of N-acetylglucosamine in Saccharopolyspora erythraea reactor cultures on the transcription of genes related to dasR regulon Examination of one time-point after 45 minutes of the addition of N-acetylglucosamine in reactor cultures.

2014-04-15 | E-GEOD-56541 | biostudies-arrayexpress

Aerobic cultivation vs Respiratory conditions

Project description:The effect of respiration (aerobic cultivation in the presence of heme and vitamin K2) was compared with unsupplemented aerobic cultivation with Lactobacillus plantarum. Two-condition experiment, aerobic vs respiring cells. Biological replicates: 3 aerobic cultures, 3 respiring cultures, independently grown and harvested. One replicate per array. Respiring cultures are called reactor 1-3; Aerobic cultures are called reactor 4-6 In the subsequent analysis data from reactor 4 were not used. There was likely a mistake made during quenching. This was concluded as new labeling/hybridisation gave same (bad) results (128a); slide 128b was dye-swap.

2010-05-16 | E-GEOD-18432 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data