Project description:The alkaliphilic halotolerant bacterium Bacillus sp. N16-5 often faces salt stress in its natural habitats. One-color microarrays was used to investigate transcriptome expression profiles of Bacillus sp. N16-5 adaptation reactions to prolonged grown at different salinities (0%, 2%, 8% and 15% NaCl) and the initial reaction to suddenly alter salinity from 0% to 8% NaCl. Salt induced gene expression was measured when culture was grown on different salinities (0%, 2%, 8% and 15% NaCl) to mid-logarithmic phase. And salt induced gene expression was also measured at 0 min, 10 min, 30 min, 60min, 120min after a sudden change salinity from 0% to 8% NaCl.

2015-01-03 | E-GEOD-64621 | biostudies-arrayexpress

Global Analysis of Carbohydrates Utilization of the Alkaline Hemicellulytic Bacteria Bacillus sp. N16-5

Project description:Alkaline hemicellulytic bacteria Bacillus sp. N16-5 has abroad substrate spectrum and exhibits great growth ability on complex carbohydrates. In order to get insight into its carbohydrate utilization mechanism, global transcriptional profiles were separately determined for growth on glucose, fructose, mannose, galactose, arabinose, xylose, galactomannan, xylan, pectin and carboxymethyl cellulose by using one-color microarrays.

2014-06-17 | GSE38276 | GEO

Shigella sonnei strain:isolated from human fecal | isolate:isolated from human fecal

Project description:Shigella sonnei strain:isolated from human fecal | isolate:isolated from human fecal Genome sequencing

| PRJNA689659 | ENA

Proteogenomic of Blastocystis sp. subtype 4 isolate WR1

Project description:description Blastocystis sp. is a highly prevalent anaerobic eukaryotic parasite of humans and animals. The genome of several representatives has been sequenced revealing specific traits such as an intriguing 3’-end processing of primary transcripts. We have acquired a first high-throughput proteomics dataset on the difficult to cultivate ST4 isolate WR1 and detected 2,761 proteins. We evidenced for the first time by proteogenomics a functional termination codon derived from transcript polyadenylation for seven different key cellular components.

2017-09-11 | PXD006588 | Pride

human gut metagenome isolate:Fecal sample

Project description:human gut metagenome isolate:Fecal sample Raw sequence reads

| PRJNA525287 | ENA

Bacillus sp. wens01 isolate:piglets

Project description:Bacillus sp. wens01 isolate:piglets Genome sequencing

| PRJNA416225 | ENA

Bacillus sp. 'calajunan' isolate:calajunan

Project description:Bacillus sp. 'calajunan' isolate:calajunan Genome sequencing

| PRJNA1285566 | ENA

Bacillus sp. SG20032 isolate:Environment

Project description:Bacillus sp. SG20032 isolate:Environment Genome sequencing