Project description:The northern white rhinoceros (Ceratotherium simum cottoni) genome and annotation were previously published, but the annotation contained few genes, with many annotation misalignments, and nomenclature not matching HGNC/VGNC naming conventions, making transcriptional studies very difficult. We used in vivo collected granulosa cells for RNA sequencing and de novo transcript assembly through StringTie to identify all nucleotide gene sequences in our samples. Through extensive manual curation we were able to generate a greatly improved genome annotation increasing gene numbers by 81%. This will greatly enable researchers in this field to utilize the genome and annotation to complete transcriptional studies with this species.
2026-01-14 | GSE300824 | GEO
Project description:Assembly and annotation of complete chloroplast genome of Ziziphus jujuba
| PRJNA794271 | ENA
Project description:Assembly and annotation of complete chloroplast genome of Ixeridium dentatum
| PRJNA1037320 | ENA
Project description:Assembly and annotation of complete chloroplast genome of Exochorda serratifolia
| PRJNA759290 | ENA
Project description:The complete chloroplast gneome of Niphotrichum japonicum
| PRJNA1037330 | ENA
Project description:complete chloroplast genome sequence annotation of light green cauliflower
| PRJNA687813 | ENA
Project description:Assembly and annotation of complete chloroplast genome of Malus domestica cv. Kamhong