Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis thaliana

ABSTRACT: Arabidopsis thaliana Col0 wild-type and triple mutant wrky7/11/17 infected with Pseudomonas syringae

PROVIDER: PRJNA1040277 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27051148_1.fastq.gz	Fastqsanger.gz
	SRR27051148_2.fastq.gz	Fastqsanger.gz
	SRR27051149_1.fastq.gz	Fastqsanger.gz
	SRR27051149_2.fastq.gz	Fastqsanger.gz
	SRR27051150_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Dynamics of membrane potential variation and gene expression induced by Spodoptera littoralis, Myzus persicae, and Pseudomonas syringae in Arabidopsis

Project description:This SuperSeries is composed of the following subset Series: GSE40922: Arabidopsis thaliana wild type control (C) vs Pseudomonas syringae infected (Pseu) GSE40923: Arabidopsis thaliana wild type mechanical damage (MD) vs herbivore wounding (HW) GSE40924: Arabidopsis thaliana wild type mechanical damage (MD) vs Myzus persicae wounding (Myz) Refer to individual Series

2012-09-18 | E-GEOD-40926 | biostudies-arrayexpress

Evolutionarily conserved bacterial effectors hijack abscisic acid signaling to induce an aqueous microenvironment in the apoplast

Project description:Purpose: The goal of this study is to compare NGS-derived Arabidopsis thaliana transcriptome profiling (RNA-Seq) obtained from tissues infected with a variety of Pseudomonas syryingae effector mutants to better understand their impact on their host's transcriptional program. We report the application of RNA-sequencing technology (Illumina Hi-Seq) for high-throughput profiling Arabidopsis thaliana transcriptomes upon infection with the model pathogen Pseudomonas syringae (wild-type and mutants).

2021-12-10 | GSE186836 | GEO

Infection of Arabidopsis thaliana seedlings (Col-0, UBQ10::YFP-TCP14-4, tcp14-6 and coi1-16) with the Pseudomonas syringae strain DC3000 cor-

Project description:This study evaluates the transcriptome of four genotypes of Arabidopsis thaliana infected at the seedling stage with the Pseudomonas syringae strain DC3000 cor-.

2017-01-12 | GSE90075 | GEO

Infection of Arabidopsis thaliana seedlings with the Pseudomonas syringae strain DC3000 cor- carrying the effector HopBB1

Project description:This study evaluates the transcriptome of Arabidopsis thaliana infected with the Pseudomonas syringae strain DC3000 cor- carrying the type three secretion system effector HopBB1

2017-01-12 | GSE90071 | GEO

RNA-seq of Arabidopsis thaliana spms and wild-type plants inoculated with Pst DC3000 or mock

Project description:RNA-seq of Arabidopsis thaliana spermine synthase (spms) mutant and wild-type (Col-0) inoculated with Pseudomonas syringae pv. tomato DC3000 or mock (MgCl2)

2023-08-31 | E-MTAB-13086 | biostudies-arrayexpress

The ALOG domain defines a new family of plant-specific Transcription Factors acting during Arabidopsis flower development.

Project description:Analysis of the transcriptome of the reproductive meristems of Arabidopsis thaliana Col-0. We compared the transcriptome obtained from lsh1 lsh3 lsh4 triple mutant to a wild type control

2024-02-06 | GSE247357 | GEO

Comparison between Arabidopsis WT plants exposed to mVOCs and control plants

Project description:ArabidopsisCol0 plants are exposed to Pseudomonas syringae pv tomato DC3000 Volatile Organic Compounds and compared to Arabidopsis Col0 plants not exposed and grown in the same conditions

2025-11-01 | GSE281883 | GEO

Arabidopsis thaliana Wild-type vs. mutant sdg2

Project description:Transcriptional profiling of Arabidopsis wild-type (Col0) control seedlings with corresponding mutant seedlings is performed using Aligent's Whole Arabidopsis Gene Expression Microarray (G2519F, V4, 4x44K).

2017-02-09 | GSE39898 | GEO

miRNA-Targeted and siRNA-Mediated mRNA Degradation Regulated by Argonaute, Dicer and RdRP

Project description:Microarray expression profiles of wild-type, ago1-10, ago1-11, and dcl1-9 Arabidopsis thaliana ec. Landsberg erecta seedling at 9, 21, and 35 days after germination. Keywords: mutant response

2006-05-17 | GSE4684 | GEO

Arabidopsis thaliana Wild-type vs. mutant (PcG)

Project description:Transcriptional profiling of Arabidopsis wild-type (Col0) control flower buds or seedlings with corresponding mutant flower buds or seedlings is performed using Aligent's Whole Arabidopsis Gene Expression Microarray (G2519F, V4, 4x44K).

2020-02-01 | GSE94731 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data