Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bos Taurus IgM and IgG repertoire for immune response phenotyped Holstein heifers

PROVIDER: PRJNA1044413 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26935209_1.fastq.gz	Fastqsanger.gz
	SRR26935210_1.fastq.gz	Fastqsanger.gz
	SRR26935211_1.fastq.gz	Fastqsanger.gz
	SRR26935212_1.fastq.gz	Fastqsanger.gz
	SRR26935213_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Effect of lactation on transcriptomic expression in bovine adipose tissue

Project description:The objective was to study the transcriptomic changes in adipose tissue in the early stages of lactation, specifically in Bos Taurus, Holstein dairy cattle as a function of milk production and genetic merit. Chip quality backgrounds averaged below 50 units, and 3'/5' bias on control genes < 2.0. Correlations among replicates were > 0.85. The design was a simple paired sampling, with time (30 d prepartum and 14 d postpartum as the sampling times. There was no dietary manipulation. Animals were all first calving Holstein heifers, all raised on the same farm on the same diet

2010-05-27 | E-GEOD-21535 | biostudies-arrayexpress

Expression data from skin of bovines infested with ticks

2014-05-23 | GSE57907 | GEO

Single-cell RNA-Seq of bovine macrophage cell lines from two cow strains infected with Theileria

Project description:To understand the immune response of cows to the apicomplexan parasite Theileria annulata, we used ex vivo isolate cells derived from two infected calve : Holstein 12886 (Bos taurus), which is known to be susceptible to the disease, and Sahiwal 82H (Bos indicus), which is known to be resistant. The infected bovine macrophages of the two species with Theileria were collected and performed multiome 10X Chromium genomics scRNA-Seq.

2024-10-09 | E-MTAB-14450 | biostudies-arrayexpress

Microarray analysis of gene expression in the skin of tick-naïve and tick-infested Holstein-Friesian and Brahman cattle

Project description:This experiment was undertaken to document changes in gene expression in the skin of tick-resistant Brahman (Bos indicus) and tick-susceptible Holstein-Friesian (Bos taurus) cattle prior to, and following, infestation with the cattle tick Rhipicephalus (Boophilus) microplus Keywords: Disease state analysis

2009-04-03 | GSE15342 | GEO

Project description:Bos Taurus Colostral and Blood IgM and IgG Repertoires

| PRJNA1153617 | ENA

Expression data from skin of bovines infested with ticks

Project description:The aim of this work was to access the early immune response triggered by R. microplus larvae attachment in previously selected resistant and susceptible animals in a bovine F2 population derived from Gyr (Bos indicus) x Holstein (Bos taurus) crosses. We used microarray data both to access the changes in gene expression over the course of the first 48 hours after tick infestation as constrasting the phenotypically diferent groups. From a bovine F2 population, six tick-resistant (R) and seven tick-susceptible (S) animals were used in this experiment. Skin biopses were taken at the feeding sites before infestation (0 hour), 24 and 48 hours after tick infestation in each animal.

2014-05-23 | E-GEOD-57907 | biostudies-arrayexpress

R. microplus expression profiles of larvae pre-attachment and feeding adult female stages in B. indicus and B. taurus

Project description:Comparative microarray analysis of Rhipicephalus (Boophilus) microplus expression profiles of larvae pre-attachment and feeding adult female stages on Bos indicus and B. taurus cattle Global analysis of gene expression changes in R. microplus during larval, pre-attachment and early adult stages of its life cycle feeding on Bos indicus and Bos taurus cattle were compared using gene expression microarray analysis. Among the 13 601 R. microplus transcripts from BmiGI Version 2 we identified 297 up and 17 down regulated transcripts were differentially expressed between R. microplus feeding on tick resistant cattle [Bos indicus (Brahman)] compared to R. microplus feeding on tick susceptible cattle [Bos taurus (Holstein-Friesian)]. These include genes encoding enzymes involved in primary metabolism, and genes related to stress, defence, cell wall modification, cellular signaling, receptor and cuticle. Microarrays were validated by qRT-PCR analysis of selected transcripts including the validation of three housekeeping genes. The analysis of all tick stages under survey suggested a coordinated regulation of defence proteins, proteases, and protease inhibitors to achieve successful attachment and survival of R. microplus on different host breeds particularly Bos indicus cattle.

2010-07-09 | GSE20605 | GEO

Bos taurus

Project description:Bos taurus (heifers) Transcriptome

| PRJNA933604 | ENA

Effect of lactation on transcriptomic expression in bovine adipose tissue

2010-04-29 | GSE21535 | GEO

R. microplus expression profiles of larvae pre-attachment and feeding adult female stages in B. indicus and B. taurus

2010-07-09 | E-GEOD-20605 | biostudies-arrayexpress