Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: A foundation for comparative genomics and evolutionary studies in Nucella lapillus based on complete mitogenome assembly

PROVIDER: PRJNA1060882 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27415500_1.fastq.gz	Fastqsanger.gz
	SRR27415501_1.fastq.gz	Fastqsanger.gz
	SRR27415502_1.fastq.gz	Fastqsanger.gz
	SRR27415503_1.fastq.gz	Fastqsanger.gz
	SRR27415504_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 45

Similar Datasets

Project description:Nucella lapillus

| PRJEB94486 | ENA

Nucella lapillus

Project description:Nucella lapillus overview

| PRJNA217693 | ENA

Nucella lapillus

Project description:Nucella lapillus RAD tags

| PRJNA215992 | ENA

Identifying differential gene expression in TBT-treated dog whelk, Nucella lapillus

Project description:Imposex, the superimposition of male sexual characteristics in females, is caused by tributyltin (TBT) and provides one of the best ecological examples of anthropogenically-induced endocrine disruption in aquatic ecosystems. We used combinations of 454 Roche pyrosequencing and microarray technologies to understand the functional genomic basis of imposex in the prosobranch gastropod, Nucella lapillus, a recognised sentinel for TBT-induced imposex.

2012-06-01 | E-MTAB-709 | biostudies-arrayexpress

xgNucLapi12

Project description:Nucella lapillus, genomic assembly, xgNucLapi12

| PRJEB94488 | ENA

Nucella lapillus isolate:BIG2024_Nlap_m_1

Project description:Nucella lapillus isolate:BIG2024_Nlap_m_1 Genome sequencing

| PRJNA1186659 | ENA

Nucella lapillus

Project description:Nucella lapillus Transcriptome or Gene expression

| PRJNA217409 | ENA

Nucella lapillus

Project description:Nucella lapillus genome sequencing and assembly

| PRJNA1238877 | ENA

xgNucLapi12

Project description:Nucella lapillus, genomic and transcriptomic data

| PRJEB94487 | ENA

Comparative multi-omic analyses of Trichinella Pseudospiralis based on a new genome assembly by long-read sequencing

Project description:Genome assemblies can form the basis of comparative analyses fostering insight into the evolutionary genetics. Genome evolution influences a parasite’s pathogenicity, host–pathogen interactions, environmental constraints and invasion biology. Comparative genomics and epigenomics analyses will provide deep understanding of parasitism biology for future diagnosis and prevention of trchinellosis. We provide a near-complete new T.p reference genome using SMRT technology, first time confirmed and characterized T.p DNA methylome, enabling full annotation. Based on this new version, we show repetitive sequences play important role in genome expansion, in synergy with DNA methylation during evolution. We further portrait the genomic and epigenomic regulation on E-S products in relation with their parasitism differences, especially for two super-families, including DNase II and EGF-like domain proteins.

2019-04-16 | GSE113105 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data