Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Semiaphis heraclei isolate: SHE_snnu_v1 Genome sequencing and assembly

PROVIDER: PRJNA1061761 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR27446524_1.fastq.gz	Fastqsanger.gz
	SRR27446524_2.fastq.gz	Fastqsanger.gz
	SRR27446525_1.fastq.gz	Fastqsanger.gz
	SRR27446525_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Transcriptomic analysis the mechanism of detoxification metabolism induced by afidopyropen in Semiaphis heraclei

Project description:In order to clarify the molecular mechanism of metabolic detoxification in Semiaphis heraclei, the transcriptome sequencing analysis was used to screen and identify the relevant genes related to metabolic detoxification after induced by afidopyropen at LD50 dose.

2024-12-02 | GSE272830 | GEO

Semiaphis heraclei

Project description:Semiaphis heraclei Genome sequencing

| PRJNA1184189 | ENA

Semiaphis heraclei

Project description:Semiaphis heraclei overview

| PRJNA1193751 | ENA

Transcriptomic analysis the mechanism of detoxification metabolism induced by afidopyropen in Semiaphis heraclei

Project description:Transcriptomic analysis the mechanism of detoxification metabolism induced by afidopyropen in Semiaphis heraclei

| PRJNA1139058 | ENA

Project description:Virome analysis of alate and apterous Semiaphis heraclei and the flowers they infest on Lonicera macranthoides

| PRJNA1499440 | ENA

A three-dimensional chromatin contact map of Puccinia graminis f.sp. tritici

Project description:Puccinia graminis f.sp. tritici (Pgt), the causal agent of stem rust disease in wheat, is one of the most destructive pathogens and can cause severe yield losses. Here, we utilize Hi-C sequencing technology to scaffold and phase the haplotypes for the genome assembly of a US Pgt isolate 99KS76A-1.

2022-10-01 | GSE210552 | GEO

Project description:Phryxe heraclei

| PRJNA1275611 | ENA

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Tandem mass spectrometry proteotyping of extremophiles sampled from high-altitude Andean lakes

Project description:The proteome of the SS13 isolate assigned to the Chromatiaceae family was assessed by shotgun proteomics using a pan-proteomics database for the genus Rheinheimera and a whole genome sequencing -derived database.

2024-05-02 | PXD044759 | Pride

ONT ULK sequencing of a male cape dune mole-rat kidney sample

Project description:One ONT-ULK sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the ONT-ULK data for this assembly.

2026-08-05 | E-MTAB-17420 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data