Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Different Origins of Bletilla striata Rhizospheric Soil Microorganisms

PROVIDER: PRJNA1062834 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27472617_1.fastq.gz	Fastqsanger.gz
	SRR27472617_2.fastq.gz	Fastqsanger.gz
	SRR27472618_1.fastq.gz	Fastqsanger.gz
	SRR27472618_2.fastq.gz	Fastqsanger.gz
	SRR27472619_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Project description:Soil microbial diversity of Bletilla striata

| PRJNA830871 | ENA

Bletilla striata

Project description:Bletilla striata overview

| PRJNA479533 | ENA

Project description:transcriptome of Bletilla striata

| PRJNA1009214 | ENA

Project description:Metagenome of the rhizosphere soil of Bletilla striata

| PRJNA1021261 | ENA

Project description:Bletilla striata raw sequence reads

| PRJNA598518 | ENA

Project description:Bletilla striata Chloroplast genome sequencing

| PRJNA877363 | ENA

Project description:Bletilla striata global developing transcriptome

| PRJNA451494 | ENA

Bletilla striata

Project description:Bletilla striata Raw sequence reads

| PRJNA1208736 | ENA

Project description:Transcriptome profiling of different organs of Bletilla striata--RNA-seq

| PRJNA579234 | ENA

Metabolic capacities of Novosphingobium sp. HR1a in the rhizosphere

Project description:Rhizoremediation, the biotechnology of the utilization of rhizospheric microorganisms associated with plant roots for the elimination of soil contaminants, is based on the ability of microorganisms to metabolize nutrients from plant root exudates, in order to survive the stressful conditions of the rhizosphere, and thereby, to co-metabolize or even mineralize toxic environmental contaminants. Novosphingobium sp. HR1a is a bacterial strain able to degrade a wide variety of polycyclic aromatic hydrocarbons (PAHs). We have demonstrated that this bacterium is able to grow in vegetated microcosms and to eliminate phenanthrene in the presence of clover faster than in non-vegetated systems, establishing a positive interaction with clover. We have studied the molecular basis of this interaction by phenomic, metabolomic and transcriptomic analyses, demonstrating that the positive interaction between clover and Novosphingobium sp. HR1a is a result of the bacterial utilization of different carbon and nitrogen sources (such as sugars, amino acids and organic acids) released during seedling development, and the capacity of exudates to induce the PAH degradation pathway. These results are pointing out to Novosphingobium sp. HR1a as a promising strain for the bioremediation of PAH-contaminated soils.

2021-04-19 | GSE172273 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data