Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptome of different intestinal segments of tropical sea cucumbers

PROVIDER: PRJNA1071841 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27871380_1.fastq.gz	Fastqsanger.gz
	SRR27871380_2.fastq.gz	Fastqsanger.gz
	SRR27871381_1.fastq.gz	Fastqsanger.gz
	SRR27871381_2.fastq.gz	Fastqsanger.gz
	SRR27871382_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 148

Similar Datasets

NA-Seq reveals dynamic changes of gene expression in key stages of intestine regeneration in the sea cucumber Apostichopus japonicus.

Project description:Sea cucumbers (Holothuroidea; Echinodermata) have the capacity to regenerate lost tissues and organs.We used RNA-Seq to determine gene expression profiles associated with intestinal regeneration in A. japonicus at 3, 7, 14 and 21 days post evisceration (dpe)

2015-01-01 | GSE44995 | GEO

NA-Seq reveals dynamic changes of gene expression in key stages of intestine regeneration in the sea cucumber Apostichopus japonicus.

2015-01-01 | E-GEOD-44995 | biostudies-arrayexpress

Project description:Data on the intestinal microbiota of sea cucumbers with yellow intestinal disease and healthy sea cucumbers

| PRJNA1301600 | ENA

High-Throughput Sequencing Reveals Differential Expression of miRNAs in respiratory tree from the sea cucumber Apostichopus japonicus Under Hypoxia Stress

Project description:The present study identified and characterized miRNAs, which may play a major role in stress resistance. we applied high-throughput sequencing to investigate the alterations of miRNAs expression of sea cucumber under hypoxia stress(DO2_1,DO2_2,DO2_3),slight hypoxia stress(DO4_1,DO4_2,DO4_3) and normal condition(DO8_1,DO8_2,DO8_3). These results will provide a basis for future studies of miRNA regulation in sea cucumbers under hypoxia stress.

2017-07-20 | GSE100603 | GEO

Project description:Intestinal microbial community of sea cucumbers sequencing

| PRJNA798500 | ENA

Understanding microRNAs regulation in heat shock response in the sea cucumber Apostichopus japonicus

Project description:In this study, we sought to determine the expression profiles of miRNAs under HS in A. japonicus by using HiSeq techinique. Nine miRNA libraries of sea cucumbers (Control: C1, C2, C3; HS 6h: 6h1, 6h2, 6h3; HS 48h: 48h1, 48h2, 48h3 ) were sequenced respectively. We highlighted differentially expressed miRNAs among HS groups, many of which were invovled of immunity process and disease regulation.

2020-06-01 | GSE115076 | GEO

Project description:Seriola dumerili different intestinal segments sequencing

| PRJNA1069331 | ENA

RNA-Seq dependent transcriptional analysis unveils adaptive mechanisms in the intestine of sea cucumber Apostichopus japonicus during aestivation

Project description:Sea cucumbers (Holothuroidea; Echinodermata), cycle annually between aestivation when water temperature is above about 25°C in the summer and active life when temperature is below about 18°C. We used RNA-Seq to determine gene expression profiles of intestine tissue of A.japonicus during non-aestivation (NA), deep-aestivation (DA), and arousal from aestivation (AA).

2015-08-08 | GSE51137 | GEO

Gene expression profiles of the respiratory tree of sea cucumber Apostichopus japonicus during aestivation by RNA-seq

Project description:Sea cucumbers (Holothuroidea; Echinodermata) cycle annually between aestivation, when water temperature is above about 25°C in the summer, and active life, when temperature is below about 18°C. We used RNA-Seq to determine gene expression profiles of respiratory tree tissue of A. japonicus during non-aestivation (NA), deep-aestivation (DA), and arousal from aestivation (AA).

2016-08-08 | GSE53815 | GEO

Project description:Neuropeptides in sea cucumbers

| PRJNA510690 | ENA