Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Burkholderia thailandensis E264

ABSTRACT: Avirulent Burkholderia

PROVIDER: PRJNA10774 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9417825.fastq.gz	Fastqsanger.gz
	SRR9417826.fastq.gz	Fastqsanger.gz
	SRR9417827.fastq.gz	Fastqsanger.gz
	SRR9417828.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 15

Similar Datasets

Burkholderia thailandensis E264

Project description:Burkholderia thailandensis E264 Genome sequencing

| PRJNA510167 | ENA

Burkholderia thailandensis E264

Project description:Burkholderia thailandensis E264 Genome sequencing

| PRJNA244539 | ENA

Quorum-sensing-regulated bactobolin production by Burkholderia thailandensis E264.

Project description:Bacterial acyl-homoserine lactones upregulated an uncharacterized gene cluster (bta) in Burkholderia thailandensis E264 to produce an uncharacterized polar antibiotic. The antibiotic is identified as a mixture of four bactobolins. Annotation of the bta cluster allows us to propose a biosynthetic scheme for bactobolin and reveals unusual enzymatic reactions for further study.

| S-EPMC2821070 | biostudies-literature

Burkholderia thailandensis E264

Project description:Burkholderia thailandensis E264 Raw sequence reads

| PRJNA889572 | ENA

Burkholderia thailandensis E264

Project description:Regulation of Choline Catabolism in Burkholderia thailandensis

| PRJNA322210 | ENA

Burkholderia thailandensis E264

Project description:Burkholderia thailandensis E264 Transcriptome or Gene expression

| PRJNA183606 | ENA

Burkholderia thailandensis E264

Project description:Burkholderia thailandensis E264 Transcriptome or Gene expression

| PRJNA233628 | ENA

Sources of diversity in bactobolin biosynthesis by Burkholderia thailandensis E264.

Project description:A series of deletion mutants in the recently identified bactobolin biosynthetic pathway defined the roles of several key biosynthetic enzymes and showed how promiscuity in three enzyme systems allows this cluster to produce multiple products. Studies on the deletion mutants also led to four new bactobolin analogs that provide additional structure-activity relationships for this interesting antibiotic family.

| S-EPMC3111747 | biostudies-literature

Burkholderia thailandensis E264 proteome and its changes upon quorum sensing disruption

Project description:The proteome of Burkholderia thailandensis E264 was assessed by shotgun proteomics as well as the proteome of the strain after quorum sensing disruption.

2023-06-09 | PXD040565 | Pride

Genomic features and virulence characteristics of a rare Burkholderia thailandensis strain causing human infection

Project description:Introduction. Burkholderia thailandensis is a clinically rare opportunistic pathogen in the genus Burkholderia, and the genomic features and virulence characteristics of B. thailandensis strains that cause human infection remain unclear.Gap Statement. B. thailandensis strains with different virulence induce different host innate immune responses in vitro.Aim. This work aimed to understand the sequence diversity, phylogenetic relationship, and virulence of B. thailandensis BPM causing human infection.Methodology. The comparative molecular and genomic analyses, and mouse infection studies were applied to analyse the virulence and genomic features of B. thailandensis BPM originating from China.Results. The whole genome sequence analysis showed that the genomes of BPM and other avirulent B. thailandensis strains were broadly similar, comprising two highly syntenic chromosomes with comparable numbers of coding regions (CDs), protein family distributions, and horizontally acquired genomic islands. By examining species-specific genomic regions, we obtained molecular explanations for previously known differences in virulence and discovered the potential specific virulence-associated genes of BPM, which likely work together to confer the virulence of BPM. Significantly reduced LD50 and survival rates during mouse infection experiments were found in BPM compared to the avirulent B. thailandensis E264 (BtE264).Conclusion. Taken together, the results of this study provide basic information on the genomic features and virulence characteristics of the virulent B. thailandensis strain BPM, which is helpful for understanding its evolution as it relates to pathogenesis and environmental adaptability.

2021-02-15 | GSE147369 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data