Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genomic and transcriptomic data of Vigna marina and Vigna luteola

PROVIDER: PRJNA1080052 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28121300.fastq.gz	Fastqsanger.gz
	SRR28121400.fastq.gz	Fastqsanger.gz
	SRR28121500.fastq.gz	Fastqsanger.gz
	SRR28121600.fastq.gz	Fastqsanger.gz
	SRR28121301.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 483

Similar Datasets

dcSpeMari

Project description:Spergularia marina, genomic and transcriptomic data

| PRJEB68267 | ENA

nrLitMari

Project description:Litoditis marina, genomic and transcriptomic data

| PRJEB87067 | ENA

peCruMari

Project description:Cruzella marina, genomic and transcriptomic data

| PRJEB65176 | ENA

wuAreMari

Project description:Arenicola marina (lugworm), genomic and transcriptomic data

| PRJEB72114 | ENA

Zostera marina

Project description:Zostera marina (eelgrass) genomic and transcriptomic data

| PRJNA1247564 | ENA

glFlaMari

Project description:Flavoplaca marina (orange sea lichen), genomic and transcriptomic data

| PRJEB59078 | ENA

Vigna marina subsp. marina

Project description:Whole Genome Sequencing of Vigna marina subsp. marina

| PRJNA445647 | ENA

Identification and Analysis of Red Sea Mangrove (Avicennia marina) microRNAs by High-Throughput Sequencing and their Association with Stress Responses

Project description:we used high-throughput Illumina Genome Analyzer IIx (GAIIx) technology to sequence the small RNA transcriptomes of the mangrove species, Avicennia marina. Based on sequence similarity or the secondary structure of precursors, we have identified 193 conserved miRNAs and 26 novel miRNAs in the small RNA transcriptome of Avicennia marina.

2013-01-23 | GSE43669 | GEO

Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

Project description:In this study, we investigated the metabolic potential of N. marina based on its complete genome sequence and performed physiological experiments to test genome-derived hypotheses. Our data confirm that N. marina benefits from additions of undefined organic carbon substrates, has adaptations to resist oxidative, osmotic and UV light-induced stress and low dissolved pCO2. Additionally, N. marina is able to grow chemoorganotrophically on formate, and is thus not an obligate chemolithoautotroph. We further investigated the metabolic response of N. marina to low (5.6 µM) O2 concentrations. In response to O2-limited conditions, the abundance of a potentially more efficient CO2-fixing pyruvate:ferredoxin oxidoreductase (POR) complex and a high-affinity cbb3-type terminal oxidase increased, suggesting a role in sustaining nitrite oxidation-driven autotrophy under O2 limitation.

2021-04-20 | PXD021606 | Pride

Project description:transcriptomic of Vigna radiata

| PRJNA764584 | ENA