Project description:Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
Project description:Geobacteraceae transfer electrons from a donor such as acetate to an electron acceptor such as Fe(III) or U(VI). Geobacter uraniireducens is found in uranium-contaminated sites and plays an important role in in situ bioremediation. In this experiment, gene expression was compared between G. uraniireducens cultures grown in sediments from a uranium contaminated site amended with acetate and cultures grown in acetate/fumarate medium. Keywords: two-condition comparison
2008-10-20 | GSE10920 | GEO
Project description:Giant sulfur bacteria (Beggiatoaceae) from sediments below the Benguela Upwelling System the host diverse microbiomes
Project description:Marine heatwaves (MHWs) are increasing in frequency and intensity globally and are among the greatest threats to marine ecosystems. However, limited studies have characterized subsurface MHWs, particularly in shallow waters. We utilized nearly two decades of full water-column (~ 10 m) observations from a unique automated profiler in central California to characterize, for the first time, the vertical structure of MHWs in a shallow nearshore upwelling system. We found MHWs have similar average durations and intensities across all depths, but there were ~ 17% more bottom MHW days than surface MHW days. Nearly one third of bottom MHWs occurred independently of surface MHWs, indicating that satellites miss a significant fraction of events. MHWs showed distinct seasonality with more frequent and intense events during the fall/winter when weak stratification allowed for MHWs to occupy a larger portion of the water column and persist longer. During summer, strong stratification limited the vertical extent of MHWs, leading to surface- and bottom-trapped events with shorter durations and intensities. Additionally, MHW initiation and termination across depths was consistently linked to anomalously low and high coastal upwelling, respectively. This study highlights the need for expansion of subsurface monitoring of MHWs globally amid a warming planet.