Project description:Microbial communities in the rhizosphere make significant contributions to crop health and nutrient cycling. However, their ability to perform important biogeochemical processes remains uncharacterized. Important functional genes, which characterize the rhizosphere microbial community, were identified to understand metabolic capabilities in the maize rhizosphere using GeoChip 3.0-based functional gene array method. Triplicate samples were taken for both rhizosphere and bulk soil, in which each individual sample was a pool of four plants or soil cores. To determine the abundance of functional genes in the rhizosphere and bulk soils, GeoChip 3.0 was used.

2014-09-12 | E-GEOD-61338 | biostudies-arrayexpress

GeoChip data of soil microbial communities in the maize rhizosphere and bulk soils

2014-12-10 | E-MTAB-2920 | biostudies-arrayexpress

Actinobacteria from the bulk soil of Paullinia cupana

Project description:Data from actinobacteria isolated from the bulk soil of Paulllinia cupana plants in Brazilian Amazon Rainforest region. Strains were cultured in solid ISP2 media, extracted with methanol.

2024-01-02 | MSV000093749 | MassIVE

Transcription profiling of 4-week old Arabidopsis plants grown in soil flooded to the soil surface (root flooding) or completely submerged under 6 cm of water (submergence)

Project description:4-week old Arabidopsis plants grown in soil were flooded to the soil surface (root flooding) or completely submerged under 6 cm of water (submergence). Samples are collected at the time specified.

2013-01-30 | E-TIGR-120 | biostudies-arrayexpress

Rhizosphere and bulk soil samples of Miscanthus

Project description:Rhizosphere and bulk soil samples of Miscanthus Raw sequence reads

| PRJNA1071673 | ENA