Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: First Report of Pantoea sp. Causing Bacterial Leaf and Panicle Blight of Rice in Louisiana, USA

PROVIDER: PRJNA1092676 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR28476100.fastq.gz	Fastqsanger.gz
	SRR28476099.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Xanthomonas sacchari

Project description:First Report of Xanthomonas sacchari Causing Bacterial Leaf and Panicle Blight of Rice in USA

| PRJNA1223440 | ENA

Transcriptional profiling of indica rice cultivar IET8585 (Ajaya) infected with bacterial leaf blight pathogen (Xoo)

2007-10-29 | GSE6244 | GEO

Transcriptomic modulations triggered by Xanthomonas oryzae pv oryzae inoculation in rice

Project description:The transcriptomic modulations leading to defense response in rice one hour after inoculation by Xanthomonas oryzae pv oryzae. Xoo and mock inoculated plant of cultivars IET8585 (bacterial leaf blight resistant) and IR-24 (bacterial leaf blight susceptible) were compared.

2012-03-12 | E-MEXP-3388 | biostudies-arrayexpress

Xanthomonas sontii

Project description:First report of rice panicle blight Caused by Xanthomonas sp. in Iran

| PRJNA587448 | ENA

Konduru2020 - Genome-scale metabolic reconstruction and in silico analysis of rice leaf blight pathogen, Xanthomonas oryzae

Project description:Genome-scale metabolic reconstruction and in silico analysis of rice leaf blight pathogen, Xanthomonas oryzae

2020-01-21 | MODEL1912100001 | BioModels

Transcription profiling of indica rice cultivar IET8585 (Ajaya) infected with bacterial leaf blight pathogen (Xoo)

Project description:An indica rice cultivar IET8585 (Ajaya), resists diverse races of the Xanthomonas oryzae pv oryzae (Xoo) pathogen attack, and is often cultivated as bacterial leaf blight (blb) resistant check in India. Earlier we reported a recessive blb resistance gene mapped to the long arm of chromosome 5 in IET8585. To further understand the mechanism of recessive and durable resistance response, two indica rice genotypes namely, i) IET8585 (Ajaya), a disease resistant indica veriety from India and ii) IR24, a bacterial leaf blight disease susceptible genotype were selected for this study. We used the 22K rice Oligoarray from Agilent technologies to study the transcript profile in the leaves of the two contrasting rice genotypes under inoculated and un-inoculated conditions during seedling stage. Experiment Overall Design: We used Agilent rice gene chips (G4138A) to investigate the transcript level changes in rice leaf tissues during bacterial pathogen infection. We used two contrasting rice genotypes (IET8585 (Ajaya) blb resistant IR24 blb susceptible) differing in bacterial disease response. Plants were grown growth chambers and inoculated with bacterial pathogen on 18th DAS. Leaf sampling was done in both un-inoculated and inoculated plants at 3 time points. Two replications of microarray experiments were carried out by hybridizing the resistant samples against the susceptible samples.

2008-06-14 | E-GEOD-6244 | biostudies-arrayexpress

First Report of Penicillium olsonii Causing Leaf Blight Disease on Petunia in China

Project description:First Report of Penicillium olsonii Causing Leaf Blight Disease on Petunia in China

| PRJEB102906 | ENA

Project description:First Report of Penicillium olsonii Causing Leaf Blight Disease on Petunia in China

| PRJNA1357643 | ENA

Rice (Nipponbare) transcriptome upon inoculation with Malian Xanthomonas oryzae pv. oryzae strain MAI1

Project description:African Xanthomonas oryzae pv. oryzae strains seem most closely related to and share several genetic features with pathovar oryzicola despite causing symptoms of bacterial leaf blight. The ability of most Xanthomonas plant pathogenic bacteria to infect their host relies on the action of a specific family of type III effectors called the TAL effectors. These microbial transcription factors are injected into the plant and manipulate the host transcriptome upon binding to the promoters of plant genes. The genes whose induction is of benefit to the pathogen are called susceptibility genes. RNA profiling experiments in rice using the Malian Xoo strain MAI1 and in silico prediction of TAL effector binding sites were carried out to identify candidate targets of TalB, revealing OsTFX1, a bZIP transcription factor previously identified as a bacterial blight S gene, and OsERF#123, which encodes a subgroup IXc AP2/ERF transcription factor.

2018-03-31 | GSE108504 | GEO

Project description:First report of Goss bacterial leaf blight on maize in South Africa.

| PRJNA1184689 | ENA