Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Symbiotic Symbiodiniaceae of scleractinian corals Pocillopora damicornis to low salinity exposure

PROVIDER: PRJNA1094918 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR28514901_1.fastq.gz	Fastqsanger.gz
	SRR28514901_2.fastq.gz	Fastqsanger.gz
	SRR28514899_1.fastq.gz	Fastqsanger.gz
	SRR28514899_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Project description:Symbiotic Symbiodiniaceae of scleractinian corals Porites lutea to low salinity exposure

| PRJNA1095587 | ENA

Project description:microbial community diversities of scleractinian corals Pocillopora damicornis to low salinity exposure

| PRJNA1095203 | ENA

Project description:Transcriptome of Pocillopora damicornis to low salinity exposure

| PRJNA1011054 | ENA

Project description:Symbiotic Symbiodiniaceae of scleractinian corals Acropora pruinosa

| PRJNA732290 | ENA

Project description:Symbiotic Symbiodiniaceae of scleractinian corals Acropora pruinosa and Pavona decussata

| PRJNA841798 | ENA

Project description:microbial community diversities of scleractinian corals Porites lutea to low salinity exposure

| PRJNA1095638 | ENA

Aboral cell types of Clytia and coral larvae have shared features and link taurine to the regulation of settlement [scRNA-Seq]

Project description:We performed single-cell RNA sequencing on the the larvae of the cnidarians Clytia hemisphaerica (Hydrozoa), Astroides calycularis (Anthozoa) and Pocillopora damicornis (Anthozoa). We identified cell types that were likely from the aboral end of the planulae and searched for genes in common that may mediate the larval settlement response.

2025-02-20 | GSE288936 | GEO

Project description:Nanopore-based RNA sequencing of scleractinian coral Pocillopora damicornis

| PRJNA647655 | ENA

Chromera velia de novo transcriptome assembly, annotation and comparative transcriptomics

Project description:Reef-building corals live in a mutualistic relationship with photosynthetic algae (family Symbiodiniaceae) that usually provide the bulk of the energy required by the coral host. This relationship is very sensitive to temperature stress, with as little as 1°C increase above mean in sea surface temperatures (SSTs) often leading to the collapse of the association. The meta-stability of these associations has led to interest in the potential of more stress tolerant algae to supplement or substitute for the normal Symbiodiniaceae mutualists. In this respect, the apicomplexan-like microalga Chromera is of particular interest as it is considerably more temperature tolerant than are most members of the Symbiodiniaceae. Here we generated a de novo transcriptome for a Chromera strain isolated from a GBR coral (“GBR Chromera”) and compared to those of the reference strain of Chromera (“Sydney Chromera”), and to those of Symbiodiniaceae algae (Fugacium, Cladocopium and Breviolum), as well as the apicomplexan parasite, Plasmodium falciparum. By contrast with the Symbiodiniaceae, the two Chromera strains had a high level of sequence similarity evident by very low levels of divergence in orthologous genes. Although surveys of specific KEGG categories provided few general criteria by which true coral mutualists might be identified, they provide a molecular rationalization for the near ubiquitous association of Cladocopium strains with Indo-Pacific reef corals in general and with Acropora spp. in particular. In addition, HSP20 genes may underlie the higher thermal tolerance shown by Chromera compared to Symbiodiniaceae

2019-11-02 | GSE139820 | GEO

jaPocDami

Project description:Pocillopora damicornis

| PRJEB76998 | ENA