Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Chlorine-stressed sewer system microbiome

PROVIDER: PRJNA1108510 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28923669_1.fastq.gz	Fastqsanger.gz
	SRR28923669_2.fastq.gz	Fastqsanger.gz
	SRR28923670_1.fastq.gz	Fastqsanger.gz
	SRR28923670_2.fastq.gz	Fastqsanger.gz
	SRR28923671_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Project description:Chlorine-stressed sewer system metagenome microbiome

| PRJNA960821 | ENA

Project description:Chlorine-stressed sewer system 16s microbiome

| PRJNA960675 | ENA

Project description:Sewer system

| PRJNA419305 | ENA

Project description:Sewer Pipes Microbiome

| PRJNA1263827 | ENA

Project description:Sewer system microbial community diversity

| PRJNA412320 | ENA

Microbiome of Sewer Biofilm

Project description:Microbiome of Sewer Biofilm Metagenome

| PRJNA615681 | ENA

Gene expression in developing fibrotic lesions in tracheas of chlorine-exposed mice

Project description:Chlorine is a widely used industrial chemical that is also considered a chemical threat agent. Inhalation of chlorine gas can cause acute injury to the respiratory tract, including the death of airway epithelial cells. Failure to efficiently repair the epithelial damage is associated with long-term respiratory abnormalities, including airway fibrosis. We previously developed a model of airway injury in which mice exposed to chlorine gas exhibit epithelial damage and develop fibrosis in large airways. In the present study, we measured gene expression in developing fibrotic lesions isolated from chlorine-exposed mice 4 days after exposure and compared to expression in corresponding areas from unexposed mice. Mesenchymal tissue was isolated by laser-capture microdissection to limit the analysis to the developing fibrotic lesions. The 4-day time point was chosen in an attempt to identify early profibrotic signaling events because at this time fibroblast proliferation has commenced but the fibrotic scar has not yet formed.

2018-01-19 | GSE109365 | GEO

Transcriptomic Profiling of Salmonella enterica Enteritidis and Typhimurium under Chlorine Based Oxidation

Project description:Investigation of whole genome gene expression level changes in Salmonella enterica serova Enteritidis and Typhimurium under chlorine treatment An eighteen chip study using total RNA isolated from three separate cultures of (1) S. Enteritidis in BHI broth (2) S. Typhimurium in BHI broth (3) S. Enteritidis in BHI broth w/ 130 ppm chlorine (4) S. Typhimurium in BHI w/ 130 ppm chlorine (5) S. Enteritidis in BHI broth w/ 390 ppm (6) S. Typhimurium in BHI broth w/ 390 ppm. Each chip measures the expression level of 5,027 ORFs covering the whole genome of S. Enteritidis and S. Typhimurium.

2010-05-06 | E-GEOD-20701 | biostudies-arrayexpress

Reactivities of proteins in model viruses (MS2, PhiX174, and T4) with free chlorine

Project description:Free chlorine is widely used as a disinfectant in households and water treatment facilities to inactivate viruses. Accumulated evidence has shown that viruses have a wide range of resistance to free chlorine. However, very little is known about molecular features, particularly viral protein structures, that drive virus inactivation by free chlorine. This project aims to optimize and apply a tandem mass tag (TMT) labeling technique to investigate the reactivities of viral proteins during the free chlorine treatment of viruses.

2025-07-10 | PXD059754 | Pride

Transcription profiling of E. coli O157

Project description:Minimal processing using chlorinated water washes is a common practice in the fresh produce industry to reduce the microbial load and bacterial pathogens attached on produce surfaces. To evaluate if E. coli O157:H7 strains with different phyllogenetic backgrounds are equally sensitive or display variable resistance to chlorine treatment, we studied the expression profile of Sakai and one 2006 spinach outbreak strain (TW 14359) in response to chlorine and hydrogen peroxide treatment. Experiment Overall Design: 2 E. coli O157 strains are incubated with or without chlorine or H2O2 for 30 min for RNA extraction and hybridization on Affymetrix microarrays. We sought to compare the expression profile between the 2 strains with or without oxidative stress.

2009-04-11 | E-GEOD-15533 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data