Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rhabdomys

ABSTRACT: Environmental and evolutionary drivers of species distributions and range limits : the case of the African four striped mouse (Rhabdomys sp.)

PROVIDER: PRJNA1117632 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR30757100_1.fastq.gz	Fastqsanger.gz
	SRR30757100_2.fastq.gz	Fastqsanger.gz
	SRR30757001_1.fastq.gz	Fastqsanger.gz
	SRR30757001_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 413

Similar Datasets

RNA sequencing of suprachiasmatic nuclues, retina, liver and lung collected at day and night from African Four Striped Mice (Rhabdomys pumilio) housed under dim vs bright daytime light

Project description:Circadian clocks are essential for generating and coordinating rhythms in animals’ physiology, behaviour, and metabolism. These activities are regulated by intracellular molecular clocks that operate with a ~24 hour periodicity. The African striped mouse, Rhabdomys pumilio, is notable for undergoing temporal niche switching from ancestrally nocturnal to diurnal, although the molecular components of its’ circadian organization remain unknown. We undertook transcriptome profiling of daily rhythms in the suprachiasmatic nucleus (SCN) and in the liver, lung and retina of Rhabdomys stably housed under a stable 12h:12h light:dark cycle with bright (n=10) or dim (n=10) daytime light intensity. Tissues were collected at two time points: two hours after lights on (Zeitgeber Time (ZT2)) coinciding with high behavioural activity, or two hours after lights off (ZT14) during the animal’s resting/sleep period, and RNA-sequencing performed.

2023-07-31 | E-MTAB-12024 | biostudies-arrayexpress

Rhabdomys pumilio

Project description:Rhabdomys pumilio overview

| PRJNA1003167 | ENA

Rhabdomys pumilio

Project description:Rhabdomys pumilio Genome sequencing

| PRJNA399358 | ENA

Project description:Genome sequencing of the African striped mouse (Rhabdomys pumilio)

| PRJNA858857 | ENA

RNA sequencing of suprachiasmatic nuclues, retina, liver and lung collected at day and night from African Four Striped Mice (Rhabdomys pumilio) housed under dim vs bright daytime light

Project description:RNA sequencing of suprachiasmatic nuclues, retina, liver and lung collected at day and night from African Four Striped Mice (Rhabdomys pumilio) housed under dim vs bright daytime light

| PRJEB55034 | ENA

Evolution of neuronal cell classes and types in the vertebrate retina [Rhabdomys]

Project description:Evolution of neuronal cell classes and types in the vertebrate retina [Rhabdomys]

| PRJNA994172 | ENA

A decision-making framework to maximise the evolutionary potential of populations - Genetic and genomic insights from the common midwife toad (Alytes obstetricans) at its range limits

Project description:Alytes obstetricans range limits (Germany, Belgium) ddRADseq

| PRJEB77624 | ENA

Rhabdomys pumilio

Project description:Data used for Johnson et al 2023

| PRJNA1004353 | ENA

Halophilic Archaea Biogeography

Project description:The Biogeography of Life at its Limits: Regional Distributions of Extremely Halophilic Archaea