Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Dietary DNA metabarcoding of overwintering spiders in agroecosystems

PROVIDER: PRJNA1121969 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29340252_1.fastq.gz	Fastqsanger.gz
	SRR29340252_2.fastq.gz	Fastqsanger.gz
	SRR29340253_1.fastq.gz	Fastqsanger.gz
	SRR29340253_2.fastq.gz	Fastqsanger.gz
	SRR29340254_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 100

Similar Datasets

Project description:Dietary DNA metabarcoding of spiders

| PRJNA1303328 | ENA

Transcriptome for gene expression in Pardosa millvina based on predator exposure

Project description:We compare levels of gene expression in predator (Tigrosa helluo) exposed female Pardosa milvina compared to unexposed spiders and the offspring of predator exposed spiders to the offspring of control spiders.

2025-07-30 | GSE183738 | GEO

Single-cell transcriptomics reveals the brain evolution of web-building spiders

Project description:Spiders are renowned for their efficient capture of flying insects using intricate aerial webs. How the spider nervous systems evolved to cope with this specialized hunting strategy and various environmental clues in an aerial space remains unknown. Here, we report a brain cell atlas of >30,000 single-cell transcriptomes from a web-building spider (Hylyphantes graminicola). Our analysis revealed the preservation of ancestral neuron types in spiders, including the potential coexistence of noradrenergic and octopaminergic neurons, and many peptidergic neuronal types that are lost in insects. By comparing the genome of two newly sequenced plesiomorphic burrowing spiders with three aerial web-building spiders, we found that the positively selected genes in the ancestral branch of web-building spiders were preferentially expressed (42%) in the brain, especially in the three mushroom body-like neuronal types. By gene enrichment analysis and RNAi experiments, these genes were suggested to be involved in the learning and memory pathway and may influence the spiders’ web-building and hunting behavior. Our results provide key sources for understanding the evolution of behavior in spiders and reveal how molecular evolution drives neuron innovation and the diversification of associated complex behaviors.

2023-10-24 | GSE241696 | GEO

Project description:Global study of dietary plant intake using DNA metabarcoding

| PRJNA1338340 | ENA

Project description:Metabarcoding identification of spiders preying on primary tea pests

| PRJNA842855 | ENA

Project description:Exploring the dietary niche of Atlantolacerta andreanskyi (Lacertidae) using DNA metabarcoding

| PRJNA1019328 | ENA

Towards functional profiling for eDNA based monitoring in coastal environments: a comparison of three approaches

Project description:Monitoring microbial communities can aid in understanding the state of these habitats. Environmental DNA (eDNA) techniques provide efficient and comprehensive monitoring by capturing broader diversity. Besides structural profiling, eDNA methods allow the study of functional profiles, encompassing the genes within the microbial community. In this study, three methodologies were compared for functional profiling of microbial communities in estuarine and coastal sites in the Bay of Biscay. The methodologies included inference from 16S metabarcoding data using Tax4Fun, GeoChip microarrays, and shotgun metagenomics.

2024-04-14 | E-MTAB-13075 | biostudies-arrayexpress

Project description:DNA methylation in overwintering buds of tea plant

| PRJNA1299549 | ENA

Transcriptome sequencing of two Baikal (Eulimnogammarus verrucosus and E. cyaneus) and one Holarctic (Gammarus lacustris) amphipod species exposed to 1.5 and 12 degree Celsius

Project description:This project aims to find the molecular changes driving the cold stress response of freshwater amphipods with different overwintering strategies

2020-09-09 | GSE157288 | GEO

Primate fecal samples

Project description:DNA metabarcoding reveals dietary adaptations of Trachypithecus langurs in limestone and rainforest habitats

| PRJNA1051001 | ENA