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Comparison of transcriptome landscape between adenine-induced and nephrectomy-induced uremic cardiomyopathy

ABSTRACT: Comparison of transcriptome landscape between adenine-induced and nephrectomy-induced uremic cardiomyopathy

PROVIDER: PRJNA1136533 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR29849200_1.fastq.gz	Fastqsanger.gz
	SRR29849200_2.fastq.gz	Fastqsanger.gz
	SRR29849201_1.fastq.gz	Fastqsanger.gz
	SRR29849201_2.fastq.gz	Fastqsanger.gz
	SRR29849187_1.fastq.gz	Fastqsanger.gz

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Comparison of transcriptome landscape between adenine-induced and nephrectomy-induced uremic cardiomyopathy

Project description:Adenine and nephrectomy can be used to establish models of uremic cardiomyopathy in rodents. Although these two approaches cause similar phenotypes of heart, adenine may directly act on cardiomyocytes and lead to different molecular changes from nephrectomy-induced uremic cardiomyopathy. Transcriptome analysis on left ventricles showed 789 upregulated and 345 downregulated genes in mice with nephrectomy-induced uremic cardiomyopathy compared to control mice, while 432 upregulated and 155 downregulated genes in mice with adenine diet-induced uremic cardiomyopathy compared to control mice. Functional analysis revealed that these DEGs were involved in pathways related to immune inflammation, metabolic responses, and synaptic transmission. Further analysis demonstrated that nephrectomy-induced uremic cardiomyopathy has enhanced cell cycle process/extracellular matrix remodeling and suppressed fatty acid metabolism, whereas adenine diet-induced uremic cardiomyopathy only exhibits increased inflammatory response/extracellular matrix remodeling. Compared with nephrectomy-induced uremic cardiomyopathy, adenine diet-induced uremic cardiomyopathy showed improved oxidative phosphorylation, aerobic electron transport chain, and tricarboxylic acid cycle, and suppressed cell cycle-related process, indicating that adenine and its derivates may affect the process of chronic kidney induced cardiac changes.

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