Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole-genome resequencing (10x depth) of North American brown bear (Ursus arctos)

PROVIDER: PRJNA1139383 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29938644_1.fastq.gz	Fastqsanger.gz
	SRR29938644_2.fastq.gz	Fastqsanger.gz
	SRR29938645_1.fastq.gz	Fastqsanger.gz
	SRR29938645_2.fastq.gz	Fastqsanger.gz
	SRR29938646_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 80

Similar Datasets

Ursus arctos horribilis

Project description:North American brown bear (Ursus arctos horribilis) genome sequencing and assembly

| PRJNA487641 | ENA

Plasma proteomics data of hibernating and active wild Scandinavian brown bears

Project description:Here we provide mass-spectrometry based plasma proteomics data of hibernating and active wild Scandinavian brown bears (Ursus arctos arctos). The brown bear hibernates for half the year. Despite obesity and the prolonged period of inactivity, bears show no signs of the harmful effects associated with these conditions in humans. Thus, the hibernating bear is a protentional translational model for addressing these complications in humans. We analyzed plasma samples from 14 subadult 2- to 3-year-old (y/o) bears (6 males and 8 females) collected both during hibernation and active state, and for some for the bears during two seasons, resulting in a total of 38 analyzed plasma samples. In triplicates, the proteins in the plasma samples were unfolded and reduced. To increase depth of the analysis and the chance to detect low molecular weight proteins and peptides, we filtered samples with a 50K MWCO filter with the aim to deplete larger proteins. The proteins in the permeate were then tryptically digested, desalted, and analyzed with liquid chromatography-tandem mass spectrometry (LC-MS/MS). Protein identification and quantification was performed with the MaxQuant software searching against an Ursus arctos horribilis protein database.

2021-12-21 | PXD030482 | Pride

Project description:Whole genome sequencing of the California Grizzly bear (Ursus arctos)

| PRJNA1252071 | ENA

RNASeq analysis of brown bear (Ursus arctos) skin tissue during active state and hibernation

Project description:RNASeq analysis of brown bear (Ursus arctos) skin tissue during active state and hibernation

| PRJEB80554 | ENA

Ancient and modern Ursus genome sequencing

Project description:Shotgun genome sequencing of 4 ancient cave bears (Ursus spelaeus complex), 1 ancient brown bear and 3 modern brown bears (Ursus arctos)

| PRJEB27491 | ENA

Ursus arctos

Project description:Ursus arctos overview

| PRJNA232787 | ENA

Brown bear skeletal muscle 2D-DIGE-LC-MSMS

Project description:Muscle atrophy is one of the main deleterious consequences of ageing and physical inactivity. Although basic knowledge regarding the underlying mechanisms of muscle atrophy is continuously growing, there are still no efficient therapeutic strategies for its prevention and treatment. Hibernating bears exhibit a strong and unique ability to preserve muscle mass in conditions where muscle atrophy is observed in humans. However, underlying mechanisms have not been understood yet. To fill this gap, the aim of this study was to characterize changes in the bear muscle proteome during hibernation versus the active period. Muscle biopsies were obtained from Ursus arctos bears.

2019-05-14 | PXD011687 | Pride

Brown bear skeletal muscle quantitative LC-MSMS

2019-05-14 | PXD004908 | Pride

Ursus arctos

Project description:Ursus arctos Genome sequencing

| PRJNA271471 | ENA

Project description:Ursus arctos dextrose reversal

| PRJNA494588 | ENA