Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Generic delimitation in the Cyphotheca-Plagiopetalum-Sporoxeia clade

PROVIDER: PRJNA1146187 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30335108_1.fastq.gz	Fastqsanger.gz
	SRR30335108_2.fastq.gz	Fastqsanger.gz
	SRR30335109_1.fastq.gz	Fastqsanger.gz
	SRR30335109_2.fastq.gz	Fastqsanger.gz
	SRR30335110_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

UreraWells

Project description:Combination of Sanger and target-enrichment markers resolves phylogenetic relationships and supports generic delimitation in the problematic ‘Urera clade’ of the nettle family (Urticaceae)

| PRJEB37665 | ENA

Panthera tigris

Project description:Generic tiger sequencing project

| PRJNA976043 | ENA

Project description:Pocillopora species delimitation

| PRJNA831687 | ENA

Clade

Project description:Clade

| PRJEB38885 | ENA

THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [DAP-seq]

Project description:DAP-seq was used to generate genome-wide DNA:TF interaction maps for fourteen maize ARFs from the evolutionarily conserved class A ‘activator’ and class B ‘repressor’ clades. Among the distinct binding sites that were identified, we observed a high degree of overlap for ARFs of the same class, but found substantial differences in motif sequence, spacing, site preference, and association with auxin induced genes among clade A and clade B ARFs.

2018-09-14 | GSE111795 | GEO

Project description:Generic boundaries in subtribe Saussureinae

| PRJNA636110 | ENA

Whole genome sequencing of fluconazole (128 µg/ml) adaptors in Candida auris

Project description:Candida auris clade III isolate B12039 was spread on YPD plate supplemented with 128 µg/ml fluconazole. Randomly 39 adaptors were chosen for further analysis. We did sequencing of them as as well as the parent.

2021-06-21 | E-MTAB-10560 | biostudies-arrayexpress

Whole genome sequencing of tunicamycin adaptors in Candida auris

Project description:Candida auris clade III isolate B11221 was spread on YPD plate supplemented with 8 µg/ml tunicamycin. Randomly 18 adaptors were chosen for further analysis. We did sequencing of these 18 adaptors as well as the parent.

2021-06-17 | E-MTAB-10536 | biostudies-arrayexpress

Whole genome sequencing of tunicamycin (8 µg/ml) adaptors in Candida auris

Project description:Candida auris clade III isolate B12039 was spread on YPD plate supplemented with 8 µg/ml tunicamycin. Randomly 27 adaptors were chosen for further analysis. We did sequencing of these 27 adaptors as well as the parent.

2021-06-13 | E-MTAB-10549 | biostudies-arrayexpress

A generic, cost-effective and scalable cell lineage analysis platform

Project description:Advances in single-cell genomics enable commensurate improvements in methods for uncovering lineage relations among individual cells. Current sequencing based methods for cell lineage analysis depend on low resolution bulk analysis or rely on extensive single cell sequencing which is not scalable and could be biased by functional dependencies. Here we show an integrated biochemical-computational platform for generic single-cell lineage analysis that is retrospective, cost-effective and scalable. It consists of a biochemical-computational pipeline that inputs individual cells, produces targeted single-cell sequencing data and uses it to generate a lineage tree of the input cells. We validated the platform by applying it to cells sampled from an ex vivo grown tree and analyzed its feasibility landscape by computer simulations. We conclude that the platform may serve as a generic tool for lineage analysis and thus pave the way towards large-scale human cell lineage discovery.

2016-04-18 | E-MTAB-4553 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data