Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Amphibian Monitoring in Aquatic Systems using eDNA Shotgun Metagenomics

PROVIDER: PRJNA1150358 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30333461_1.fastq.gz	Fastqsanger.gz
	SRR30333462_1.fastq.gz	Fastqsanger.gz
	SRR30333463_1.fastq.gz	Fastqsanger.gz
	SRR30333464_1.fastq.gz	Fastqsanger.gz
	SRR30333465_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Towards functional profiling for eDNA based monitoring in coastal environments: a comparison of three approaches

Project description:Monitoring microbial communities can aid in understanding the state of these habitats. Environmental DNA (eDNA) techniques provide efficient and comprehensive monitoring by capturing broader diversity. Besides structural profiling, eDNA methods allow the study of functional profiles, encompassing the genes within the microbial community. In this study, three methodologies were compared for functional profiling of microbial communities in estuarine and coastal sites in the Bay of Biscay. The methodologies included inference from 16S metabarcoding data using Tax4Fun, GeoChip microarrays, and shotgun metagenomics.

2024-04-14 | E-MTAB-13075 | biostudies-arrayexpress

Project description:Monitoring aquatic microbial diversity using a novel eDNA sampler

| PRJNA917080 | ENA

West Virginia streams eDNA survey

Project description:Impact of mountaintop coal mining on aquatic biodiversity - Multikingdom monitoring using eDNA sequencing

| PRJEB37092 | ENA

Project description:eDNA based monitoring for risks associated with Batrachochytrium dendrobatidis for amphibian species - 2019

| PRJNA821076 | ENA

Project description:eDNA based monitoring for risks associated with Batrachochytrium dendrobatidis for amphibian species - 2020

| PRJNA822096 | ENA

Project description:Environmental DNA (eDNA) and field surveys as complementary tools for monitoring amphibian communities

| PRJNA1085709 | ENA

Project description:Vernal pools - amphibian eDNA metabarcoding

| PRJNA1062408 | ENA

Project description:Monitoring of spatio-temporal habitat occupancy patterns of fish and amphibian species in a lentic aquatic system using environmental DNA

| PRJNA616325 | ENA

Project description:eDNA metabarcoding - aquatic plants

| PRJNA610028 | ENA

Project description:An amphibian CytB eDNA-based dataset

| PRJEB81203 | ENA