Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Phyllosphere epiphytic microorganisms

PROVIDER: PRJNA1152722 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30429800_1.fastq.gz	Fastqsanger.gz
	SRR30429800_2.fastq.gz	Fastqsanger.gz
	SRR30429900_1.fastq.gz	Fastqsanger.gz
	SRR30429900_2.fastq.gz	Fastqsanger.gz
	SRR30488700_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1857

Similar Datasets

phyllosphere epiphytic microorganisms

Project description:phyllosphere epiphytic microorganisms Raw sequence reads

| PRJNA1240103 | ENA

Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000

Project description:Plants are colonized by a variety of microorganisms, the plant microbiota. In the phyllosphere, the above-ground parts of plants, bacteria are the most abundant inhabitants. Most of these microorganisms are not pathogenic and the plant responses to commensals or to pathogen infection in the presence of commensals are not well understood. We report the Arabidopsis leaf transcriptome after 3 to 4 weeks of colonization by Methylobacterium extorquens PA1 and Sphingomonas melonis Fr1, representatives of two abundant genera in the phyllosphere, compared to axenic plants. In addition, we also sequenced the transcriptome of Arabidopsis 2 and 7 days after spray-infection with a low dose of P. syringae DC3000 and in combination with the commensals.

2016-06-05 | E-MTAB-4683 | biostudies-arrayexpress

Project description:Phyllosphere epiphytic fungi

| PRJNA942068 | ENA

Project description:Phyllosphere epiphytic bacteria

| PRJNA942029 | ENA

Project description:Phyllosphere epiphytic fungal metagenome

| PRJNA816980 | ENA

Project description:Phyllosphere epiphytic bacterial metagenome

| PRJNA798840 | ENA

Project description:phyllosphere microorganisms

| PRJNA1106228 | ENA

Transcriptome analysis of Arthrobacter in the phyllosphere

2013-06-21 | GSE48198 | GEO

Transcriptome analysis of Arthrobacter in the phyllosphere

Project description:Arthrobacter chlorophenolicus A6 is a 4-chlorophenol degrading soil bacterium with high phyllosphere colonization capacity. Till now the genetic basis for the phyllosphere competency of Arthrobacter or other pollutant-degrading bacteria is uncertain. We investigated global gene expression profile of A. chlorophenolicus grown in the phyllosphere of common bean (Phaseolus vulgaris) compared to growth on agar surfaces. We designed transcriptome arrays and investigated which genes had different transcript levels in the phyllosphere of common bean (Phaseolus vulgaris) as compared to agar surfaces. Since water availability is considered an important factor in phyllosphere survival and activity, we included both high and low relative humidity treatments for the phyllosphere-grown cells. In addition, we determined the expression profile under pollutant exposure by the inclusion of two agar surface treatments, i.e. with and without 4-chlorophenol.

2013-06-21 | E-GEOD-48198 | biostudies-arrayexpress

Project description:Fertilization and phyllosphere microorganisms

| PRJNA1192731 | ENA