Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium oxysporum f. sp. vasinfectum strain:TX1

ABSTRACT: Fusarium oxysporum f. sp. vasinfectum (MT-type) Genome sequencing and assembly

PROVIDER: PRJNA1158739 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30718872_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Cotton (Gossypium barbadense) root transcriptional response to Fusarium oxysporum f.sp. vasinfectum (FOV) race 4 (FOV4) infection

Project description:We performed RNA-seq analysis of the root transcriptional response to Fusarium oxysporum f.sp. vasinfectum (FOV) race 4 (FOV4) infection in Gossypium barbadense, also known as Pima cotton. Susceptible Gossypium barbadense inbred lines Pima S-7 (PI 560140) and Pima 3-79 susceptible to Fusarium wilt [Fusarium oxysporum f.sp. vasinfectum (FOV)] race 4 (FOV4), and Pima S-6 (PI 608346) which is resistant to FOV4 infection, were used for the preparation of cDNA libraries and further RNA-seq analyses. An isolate of FOV4 (FOV CA-14) from a naturally infested field in Fresno County in the San Joaquin Valley, California was used in this study.

2023-11-30 | GSE233711 | GEO

Fusarium oxysporum f. sp. vasinfectum (UP000030701) extracellular vesicle, secretome, and cell lysate proteomes

Project description:We performed a comparative study to determine the proteome of extracellular vesicles (EVs) from the cotton pathogen Fusarium oxysporum f. sp. vasinfectum (Fov), recovered from two growth conditions in vitro. Label-free quantitative protemics was used to find significant enrichment of proteins between EV samples, the secretome (secreted-soluble proteins) and the cell lysate. Our results show that some proteins were exclusive to EVs and were upregulated compared to the secretome or cell lysate.

2021-03-08 | PXD023907 | Pride

Fusarium oxysporum f. sp. vasinfectum

Project description:Fusarium oxysporum f. sp. vasinfectum Genome sequencing and assembly

| PRJNA1289176 | ENA

Fusarium oxysporum f. sp. vasinfectum

Project description:Fusarium oxysporum f. sp. vasinfectum Genome sequencing and assembly

| PRJNA1289184 | ENA

Fusarium oxysporum f. sp. vasinfectum

Project description:Fusarium oxysporum f. sp. vasinfectum race 7 Genome sequencing and assembly

| PRJNA1073426 | ENA

Fusarium oxysporum f. sp. vasinfectum 25433

Project description:Fusarium oxysporum f. sp. vasinfectum 25433 Genome sequencing and assembly

| PRJNA73537 | ENA

Fusarium oxysporum f. sp. vasinfectum

Project description:Fusarium oxysporum f. sp. vasinfectum race 3 (FOV3) Genome sequencing and assembly

| PRJNA1287748 | ENA

Fusarium oxysporum f. sp. vasinfectum

Project description:Fusarium oxysporum f. sp. vasinfectum race 4 N-biotype Genome sequencing and assembly

| PRJNA1003910 | ENA

Fusarium oxysporum f. sp. vasinfectum isolate:ME-23

Project description:Fusarium oxysporum f. sp. vasinfectum race 1 Genome sequencing and assembly

| PRJNA983313 | ENA

Genome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense

Project description:Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h.

2014-08-27 | GSE40581 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data