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ABSTRACT: Liverpool Epidemic Strain Sequencing

PROVIDER: PRJNA1178731 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR31143500_1.fastq.gz	Fastqsanger.gz
	SRR31143500_2.fastq.gz	Fastqsanger.gz
	SRR31143501_1.fastq.gz	Fastqsanger.gz
	SRR31143501_2.fastq.gz	Fastqsanger.gz
	SRR31143502_1.fastq.gz	Fastqsanger.gz

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Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain.

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Response of Pseudomonas aeruginosa laboratory strain PAO1 and clinical isolates LESlike1, LESB58, and LES431 to antibiotic treatments

Project description:Pseudomonas aeruginosa is a predominant pathogen in chronic lung infections in individuals with cystic fibrosis (CF). Epidemic strains of P. aeruginosa, such as the Liverpool Epidemic Strain (LES), are capable of transferring between CF patients and have been associated with increased hospital visits and antibiotic treatments. We used label-free quantitative proteomics to compare the laboratory strain PAO1, beta-lactam resistant isolate LESB58, and beta-lactam susceptible isolate LESlike1 and their responses to three beta-lactams (aztreonam, carbenicillin, piperacillin), the aminoglycoside tobramycin, and hydrogen peroxide. Across all samples, we identified 3019 proteins with a minimum of two peptides. We found that LESB58 showed a large response to treatment with the beta-lactam carbenicillin, with 644 proteins significantly increased in abundance and 590 proteins significantly decreased in abundance (Students t-test, p≤0.05, FDR=0.05, S0=1). Proteomic characterization of an additional beta-lactam resistant isolate, LES431, exposed to carbenicillin showed that this response was shared by both isolates. Part of the response to carbenicillin in LESB58 included an increase in abundance in proteins involved in cell wall synthesis and division.

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