Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Burkholderia pseudomallei strain:CM000132 | isolate:CM000132

ABSTRACT: Burkholderia pseudomallei strain CM000132 Raw sequence reads

PROVIDER: PRJNA1190616 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR33744084_1.fastq.gz	Fastqsanger.gz
	SRR33744084_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Comparative transcriptomics of Burkholderia pseudomallei from soil media and infected host

Project description:Burkholderia pseudomallei can adapt to and thrive in a variety of environments, including soil and water, and also can infect different hosts, including humans, leading to the tropical disease melioidosis. Modulation of gene and protein expression is one of this pathogen's adaptive survival mechanisms, which could lead to changes in the bacteria's cell membrane, metabolism, and virulence. To better understand bacterial adaptation and host-pathogen interactions, this study compared the expression profiles of B. pseudomallei from infected mice to B. pseudomallei cultivated in soil extract media. B. pseudomallei in vivo was created by infecting mice through the intraperitoneal route and harvesting the spleens on day 5 post infection. Total RNA was isolated and sequenced from the harvested spleen. Sequence reads were mapped to the B. pseudomallei UKMD286 strain genome sequence.

2022-07-22 | E-MTAB-11200 | biostudies-arrayexpress

Burkholderia pseudomallei strain:CM000170 | isolate:CM000170

Project description:Burkholderia pseudomallei strain CM000170 Raw sequence reads

| PRJNA1268922 | ENA

Burkholderia pseudomallei strain:CM000102 | isolate:CM000102

Project description:Burkholderia pseudomallei strain CM000102 Raw sequence reads

| PRJNA1269278 | ENA

Burkholderia pseudomallei strain:CM000189 | isolate:CM000189

Project description:Burkholderia pseudomallei strain CM000189 Raw sequence reads

| PRJNA1190602 | ENA

Burkholderia pseudomallei strain:CM000253 | isolate:CM000253

Project description:Burkholderia pseudomallei strain CM000253 Raw sequence reads