Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Guizotia abyssinica cultivar:noug

ABSTRACT: Guizotia abyssinica cultivar:noug Genome sequencing and assembly

PROVIDER: PRJNA1193105 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32462300_1.fastq.gz	Fastqsanger.gz
	SRR32462300_2.fastq.gz	Fastqsanger.gz
	SRR32462400_1.fastq.gz	Fastqsanger.gz
	SRR32462400_2.fastq.gz	Fastqsanger.gz
	SRR32462301_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 576

Similar Datasets

Guizotia abyssinica

Project description:Guizotia abyssinica overview

| PRJNA454339 | ENA

Guizotia abyssinica cultivar:RCR-18 variety

Project description:Guizotia abyssinica cultivar:RCR-18 variety Raw sequence reads

| PRJNA431883 | ENA

Guizotia abyssinica cultivar:RCR-18 variety

Project description:Guizotia abyssinica cultivar:RCR-18 variety Raw sequence reads

| PRJNA430159 | ENA

Guizotia

Project description:Understanding the Diversity of Niger(Guizotia Abyssinica) Genotypes using Transcriptomes.

| PRJNA993801 | ENA

Oxytenanthera abyssinica breed:Oxytenanthera abyssinica | cultivar:Oxytenanthera abyssinica

Project description:Oxytenanthera abyssinica breed:Oxytenanthera abyssinica | cultivar:Oxytenanthera abyssinica Transcriptome or Gene expression

| PRJNA481420 | ENA

Cecropis abyssinica

Project description:Cecropis abyssinica

| PRJNA920614 | ENA

Oxytenanthera abyssinica

Project description:Oxytenanthera abyssinica overview

| PRJNA826594 | ENA

Sylvia abyssinica strain:NA

Project description:Sylvia abyssinica

| PRJNA969051 | ENA

Molecular link between leaf coloration and gene expression of flavonoid and carotenoid biosynthesis in Camellia sinensis cultivar ‘Huangjinya’

Project description:The transcriptome of a light sensitive tea cultivar ‘Huangjinya’ plants exposed to sunlight and shade were analyzed by high-throughput sequencing followed by de novo assembly.

2017-06-23 | GSE97659 | GEO

Patterns of domestication in the Ethiopian oil-seed crop noug (Guizotia abyssinica).

Project description:Noug (Guizotia abyssinica) is a semidomesticated oil-seed crop, which is primarily cultivated in Ethiopia. Unlike its closest crop relative, sunflower, noug has small seeds, small flowering heads, many branches, many flowering heads, and indeterminate flowering, and it shatters in the field. Here, we conducted common garden studies and microsatellite analyses of genetic variation to test whether high levels of crop-wild gene flow and/or unfavorable phenotypic correlations have hindered noug domestication. With the exception of one population, analyses of microsatellite variation failed to detect substantial recent admixture between noug and its wild progenitor. Likewise, only very weak correlations were found between seed mass and the number or size of flowering heads. Thus, noug's 'atypical' domestication syndrome does not seem to be a consequence of recent introgression or unfavorable phenotypic correlations. Nonetheless, our data do reveal evidence of local adaptation of noug cultivars to different precipitation regimes, as well as high levels of phenotypic plasticity, which may permit reasonable yields under diverse environmental conditions. Why noug has not been fully domesticated remains a mystery, but perhaps early farmers selected for resilience to episodic drought or untended environments rather than larger seeds. Domestication may also have been slowed by noug's outcrossing mating system.

| S-EPMC4430770 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data