Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR31597600_1.fastq.gz | Fastqsanger.gz | |||
| SRR31597600_2.fastq.gz | Fastqsanger.gz | |||
| SRR31597700_1.fastq.gz | Fastqsanger.gz | |||
| SRR31597700_2.fastq.gz | Fastqsanger.gz | |||
| SRR31597601_1.fastq.gz | Fastqsanger.gz |
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Project description:Endophytic fungi are fungi that live inside the roots of plants. They can promote plant growth through a variety of direct and indirect mechanisms. Direct mechanisms include the production of phytohormones, such as auxin and gibberellins, which can stimulate plant growth. Endophytic fungi can also fix nitrogen, solubilize phosphate, and produce siderophores, which are compounds that chelate iron and make it available to plants. In addition, some endophytic fungi produce antimicrobial metabolites that can protect plants from pests and pathogens. Indirect mechanisms include the induction of systemic resistance, which is a plant's ability to defend itself against pests and pathogens. Endophytic fungi can also help plants to tolerate abiotic stresses, such as drought, salinity, and heavy metals. In this study, we used a proteomic approach to identify the proteins that are expressed in rice plants after they are treated with endophytic fungi. We found that the treatment with endophytic fungi resulted in the expression of a number of proteins involved in plant growth, stress response, and defense. These results suggest that endophytic fungi can promote plant growth and improve plant resilience to stress.
2024-09-10 | PXD045243 | JPOST Repository
Project description:This study was aimed at highlighting the endophytic to the saprophytic adaptive plasticity of B. bassiana. Thus the objective was to elucidate and compare the transcriptome of B. bassiana the fungi under endophytic, saprophytic and basal conditions.
2023-12-31 | GSE221727 | GEO
Project description:Endophytic fungi are root-inhabiting fungi that can promote plant growth in a variety of ways. They can directly stimulate plant growth by producing phytohormones, such as auxin and gibberellins. They can also indirectly promote plant growth by helping plants to acquire nutrients, such as nitrogen and phosphorus, and by protecting plants from pests and pathogens.In this study, we used a proteomic approach to identify the proteins that are expressed in rice plants after they are treated with endophytic fungi. We found that the treatment with endophytic fungi resulted in the expression of a number of proteins involved in plant growth, nutrient acquisition, and defense. These results suggest that endophytic fungi can promote plant growth and improve plant resilience to stress.
2024-09-10 | PXD045242 | JPOST Repository
Project description:<p>Plant-leaf endophytic fungi mutualism is essential for plants to adapt to adverse environments. Though introgression has been extensively studied in many plants, the underlying effects of introgression on fungi-driven adaptability still remain unanswered. Here, we performed landscape-scale sampling of natural populations across its typical distribution range in China to disentangle how introgression effects endophytic fungal community within oak leaves. Our results showed that fungal diversity was decreased while fungal co-occurrence network complexity was increased with increasing introgression index, reflecting a “dual adaptation strategy” to respond to environmental challenges. This pattern was also linked to metacommunity: the lowest diversity occurred in metacommunity that characterized by the lowest mean annual temperature and annual precipitate, whereas the highest fungal network complexity appeared in metacommunity that had the highest mean annual temperature and optimal annual precipitate. Importantly, the differential metabolite intensities (e.g., organoheterocyclic compounds, and organoheterocyclic compounds) and climate factors mediated the leaf endophytic fungi-driven adaptability of oak trees. This work not only advances our understanding of plant-microbe interactions in the context of evolutionary ecology but also provides insight into the importance of fungal community restructuring in facilitating plant adaptation to environmental change.</p>
2025-11-28 | MTBLS13410 | MetaboLights
Project description:High ambient temperature regulated the plant systemic response to the beneficial endophytic fungus Serendipita indica. Most plants in nature establish symbiotic associations with endophytic fungi in soil. Beneficial endophytic fungi induce a systemic response in the aboveground parts of the host plant, thus promoting the growth and fitness of host plants. Meanwhile, temperature elevation from climate change widely affects global plant biodiversity as well as crop quality and yield. Over the past decades, great progresses have been made in the response of plants to high ambient temperature and to symbiosis with endophytic fungi. However, little is known about their synergistic effect on host plants. The endophytic fungus Serendipita indica colonizes the roots of a wide range of plants, including Arabidopsis. Based on the Arabidopsis-S. indica symbiosis experimental system, we analyzed the synergistic effect of high ambient temperature and endophytic fungal symbiosis on host plants. By transcriptome analysis, we found that DNA replication-related genes were significantly upregulated during the systemic response of Arabidopsis aboveground parts to S. indica colonization. Plant hormones, such as jasmonic acid (JA) and ethylene (ET), play important roles in plant growth and systemic responses. We found that high ambient temperature repressed the JA and ET signaling pathways of Arabidopsis aboveground parts during the systemic response to S. indica colonization in roots. Meanwhile, PIF4 is the central hub transcription factor controlling plant thermosensory growth under high ambient temperature in Arabidopsis. PIF4 is also involving JA and/or ET signaling pathway. We found that PIF4 target genes overlapped with many differentially expressed genes (DEGs) during the systemic response, and further showed that the growth promotion efficiency of S. indica on the pif4 mutant was higher than that on the wild type plants.
2022-02-26 | GSE197325 | GEO
Project description:Adoptive cell therapy (ACT) relies on durable and functional T cells to mediate tumor clearance. Th9 cells are a metabolically fit CD4⁺ T cell subset with strong persistence but limited cytotoxicity. Here, we identify Endomelipaneptide A (EpA), a cyclic peptide from Ganoderma lucidum–associated endophytic fungi, as a potent enhancer of Th9 differentiation. EpA promotes a cytotoxic Th9 phenotype with enhanced mitochondrial function and metabolic fitness.
2025-11-28 | GSE296515 | GEO
Project description:Contribution of endophytic fungi to leaf litter communities
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Project description:Effects of Introgression on Leaf Endophytic Fungi (PRJCA047701)
| PRJDB39518 | ENA
Project description:Endophytic fungi of tobacco leaf Raw sequence reads
| PRJNA698403 | ENA
Project description:Contribution of endophytic fungi to leaf litter communities
| PRJEB21700 | ENA