Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Listeria monocytogenes strain:SA_SR | isolate:SA_SR

ABSTRACT: Listeria monocytogenes strain:SA_SR | isolate:SA_SR Genome sequencing

PROVIDER: PRJNA1197405 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR31830240_1.fastq.gz	Fastqsanger.gz
	SRR31830240_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Listeria monocytogenes strain:4/52-1953 | isolate:Listeria monocytogenes 4

Project description:Listeria monocytogenes strain:4/52-1953 | isolate:Listeria monocytogenes 4 Genome sequencing

| PRJNA604519 | ENA

Listeria monocytogenes exposure to chlorine dioxide

2014-03-07 | GSE48187 | GEO

Surface Proteins of Listeria monocytogenes

Project description:Listeria monocytogenes cells (strain LI0521) were digested with trypsin for the identification of surface proteins. The supernatant was filter-sterilized and subjected to identification by LC-MS/MS. Concurrently secreted or shed proteins were identified by isolating filter-sterilized supernatants following incubation of L. monocytogenes cells in buffer without trypsin. This was followed by trypsin digest of the sterilized supernatant and identification by LC-MS/MS.

2013-08-27 | PXD000035 | Pride

Listeria monocytogenes strain:UKVDL9 | isolate:UKVDL9

Project description:Listeria monocytogenes strain:UKVDL9 | isolate:UKVDL9 Genome sequencing

| PRJNA679051 | ENA

Listeria monocytogenes strain:24Q419 | isolate:24Q419

Project description:Listeria monocytogenes strain:24Q419 | isolate:24Q419 Genome sequencing

| PRJNA1214584 | ENA

Listeria monocytogenes strain:AUF | isolate:A

Project description:Listeria monocytogenes strain:AUF | isolate:A Genome sequencing

| PRJNA604515 | ENA

Listeria monocytogenes strain:2 | isolate:2

Project description:Listeria monocytogenes strain:2 | isolate:2 Genome sequencing

| PRJNA1291607 | ENA

Listeria monocytogenes exposure to chlorine dioxide

Project description:Listeria monocytogenes strain 10403S has been studied extensively for stress response activity toward multiple stressors (acid, osmotic, cold, high temperature, etc.) as well as multiple stress regulons (SigB, CtsR, HrcA, etc.). Here we aimed to determine the transcriptional response of Listeria monocytogenes in early log phase towards the strong oxidative stress imposed by ClO2. The elucidation of such a response allows for further a more completel understanding of the mechanism of inactivation by sanitizers, specifically ClO2. Independent RNA isolations were performed for strain 10403S with and without exposure to ClO2 from cells grown to early log phase. Four biological replicates were used in competitive whole-genome microarray experiments. For each set of hybridizations, RNA from a control sample of Listeria monocytogenes was hybridized with RNA from a culture of L. monocytogenes following exposure to ClO2. Dye swapping was performed for the four replicates to mitigate any concerns of dye bias.

2014-03-07 | E-GEOD-48187 | biostudies-arrayexpress

Listeria monocytogenes strain:BDSA | isolate:BDSA

Project description:Listeria monocytogenes | isolate:BDSA Genome sequencing

| PRJNA1046657 | ENA

Listeria monocytogenes Transcriptome with RNA-Seq

Project description:The stationary phase stress response transcriptome of the human bacterial pathogen Listeria monocytogenes was defined using RNA sequencing (RNA-Seq) with the Illumina Genome Analyzer. Specifically, bacterial transcriptomes were compared between stationary phase cells of L. monocytogenes 10403S and an otherwise isogenic DsigB mutant, which does not express the alternative sigma factor σB, a major regulator of genes contributing to stress response. Keywords: Transcriptome and differential expression analyses

2010-01-05 | GSE15651 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data