Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Virome diversity and zoonotic risks of rodents along ecological gradients in the Northern Tianshan Mountains, China

PROVIDER: PRJNA1198664 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31761500_1.fastq.gz	Fastqsanger.gz
	SRR31761500_2.fastq.gz	Fastqsanger.gz
	SRR31761501_1.fastq.gz	Fastqsanger.gz
	SRR31761501_2.fastq.gz	Fastqsanger.gz
	SRR31761502_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Comparison of the Cowpox Virus and Vaccinia Virus Mature Virion Proteome: Analysis of the species- and strain-specific Proteome

Project description:Cowpox virus (CPXV) causes most zoonotic orthopoxvirus (OPV) infections in Europe and Northern as well as Central Asia. The virus has the broadest host range of OPV and is transmitted to humans from rodents and other wild or domestic animals. Increasing numbers of human CPXV infections in a population with declining immunity have raised concerns about the virus’ zoonotic potential. While there have been reports on the proteome of other human-pathogenic OPV, namely vaccinia virus (VACV) and monkeypox virus (MPXV), the protein composition of the CPXV mature virion (MV) is unknown. This study focused on the comparative analysis of the VACV and CPXV MV proteome by label-free single-run proteomics using nano liquid chromatography and high-resolution tandem mass spectrometry (nLC-MS/MS).

2015-11-16 | PXD003013 | Pride

Project description:Soil fungal diversity along the elevational gradients of the mountains

| PRJNA1158445 | ENA

Aiphanes

Project description:Evolution of Aiphanes (Arecaceae) along mountain gradients in the Northern Andes

| PRJNA689999 | ENA

Rodents

Project description:Virome composition in Rodents

| PRJNA1161815 | ENA

Transcriptomic analysis of young roots of spruce tianshan treated with 1mMDHAP (3,4 dihydroxyacetophenone)

Project description:In past studies the hypothesis of "self-toxicity of natural regeneration barriers of Spruce tianshan" were proposed, and verified that 3, 4-dihydroxyacetophenone (DHAP) contained in litter of Spruce Tianshan was the direct cause of population regeneration barriers.The molecular basis of DHAP-induced autotoxicity was explored through transcriptomic analysis of young roots of spruce tianshan treated with DHAP (3,4 dihydroxyacetophenone).

2021-01-01 | GSE160134 | GEO

The unexpected role of HBx in UC

Project description:Ulcerative colitis is a chronic inflammatory disorder for which a definitive cure is still missing. This is characterized by an overwhelming inflammatory milieu in the colonic tract where a composite set of immune and non-immune cells orchestrate its pathogenesis. Over the last years, a growing body of evidence has been pinpointing gut virome dysbiosis as underlying its progression. Nonetheless, its role during the early phases of chronic inflammation is far from being fully defined. Here we show the gut virome-associated Hepatitis B virus protein X, most likely acquired after an event of zoonotic spillover, to be associated with the early stages of ulcerative colitis and to induce colonic inflammation in mice. It acts as a transcriptional regulator in epithelial cells, provoking barrier leakage and altering mucosal immunity at the level of both innate and adaptive immunity. This study paves the way to the comprehension of the aetiopathogenesis of intestinal inflammation and encourages further investigations of the virome as a trigger also in other scenarios. Moreover, it provides a brand-new standpoint that looks at the virome as a target for tailored treatments, blocking the early phases of chronic inflammation and possibly leading to better disease management.

2023-02-20 | GSE204665 | GEO

GNPS UHPLC-MS/MS data of Artemisia heptapotamica extract

Project description:Artemisia heptapotamica is a plant endemic to the northern Tianshan Mountains (a large mountain range system in the Eurasia hinterland), which has undergone little chemical investigation. Sesquiterpene lactones (SLs) have considerable potential as building blocks for drug design due to their diverse biological properties. This dataset is the UHPLC-MS/MS data of Artemisia heptapotamica extract for discovering the sesquiterpenoids with indicate building blocks of SLs.

2023-06-01 | MSV000092075 | GNPS

Coral microbiome (endosymbiotic dinoflagellates and 16S rRNA bacterial community)

Project description:Microbiome associated with six corals species along thermal gradients in the northern Red Sea

| PRJNA509355 | ENA

Project description:Dynamics of the virgin temperate forests soil microbiome along the altitudinal gradients in Northern Iran

| PRJNA607056 | ENA

Project description:Soil microbial diversity along elevational gradients

| PRJNA772054 | ENA