Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Madracis senaria

ABSTRACT: Madracis senaria overview

PROVIDER: PRJNA1199131 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR13946476.fastq.gz	Fastqsanger.gz
	ERR13947492_1.fastq.gz	Fastqsanger.gz
	ERR13947492_2.fastq.gz	Fastqsanger.gz
	ERR13947493_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Madracis decactis

Project description:Madracis decactis overview

| PRJNA1308253 | ENA

Madracis auretenra

Project description:Madracis auretenra overview

| PRJNA1117171 | ENA

Madracis auretenra

Project description:Madracis auretenra 16S rRNA V4 Raw sequence reads

| PRJNA1103847 | ENA

Madracis decactis

Project description:Madracis decactis Taq-seq sequences when exposed to photosynthesis irradiance - thermal performance curves

| PRJNA1254643 | ENA

Madracis decactis

Project description:Algal endosymbiont communities of the coral species Madracis decactis in two locations in Brazil.

| PRJNA732715 | ENA

Madracis decactis

Project description:Madracis decactis Taq-seq raw sequence reads throughout exposure to experimental cis and trans priming

| PRJNA1308128 | ENA

Madracis decactis

Project description:Using RNAseq to construct the de novo transcriptomes of Madracis decactis, Diploria labyrinthiformis and Montastraea cavernosa.

| PRJNA1228646 | ENA

Development of microsatellites markers for the deep coral Madracis myriaster (Pocilloporidae: Anthozoa).

Project description:In 2013 Colombia made an important step towards the construction and management of Marine Protected Areas (MPAs) by establishing the first Deep Corals National Park (PNNCP). Inside this MPA, the coral Madracis myriaster (Cnidaria: Pocilloporidae) was found as the main reef builder, offering habitat for many species of fish and invertebrates. In order to improve the study of deep-sea coral habitats, their connectivity and prospective management, nine new genetic markers (microsatellites) were developed for M. myriaster and tested in samples from PNNCP. We present the assessment of these markers, with a specificity for the deep coral, and its prospective use in future analysis for the PNNCP and other areas in the Caribbean and the Atlantic, where M. myriaster is reported. We also include an additional taxonomic analysis performed on samples of M. myriaster using scanning electron microscopy.

| S-EPMC9343366 | biostudies-literature

Comparison between colony morphology and molecular phylogeny in the Caribbean scleractinian coral genus Madracis.

Project description:A major challenge in coral biology is to find the most adequate and phylogenetically informative characters that allow for distinction of closely related coral species. Therefore, data on corallite morphology and genetic data are often combined to increase phylogenetic resolution. In this study, we address the question to which degree genetic data and quantitative information on overall coral colony morphologies identify similar groupings within closely related morphospecies of the Caribbean coral genus Madracis. Such comparison of phylogenies based on colony morphology and genetic data will also provide insight into the degree to which genotype and phenotype overlap. We have measured morphological features of three closely related Caribbean coral species of the genus Madracis (M. formosa, M. decactis and M. carmabi). Morphological differences were then compared with phylogenies of the same species based on two nuclear DNA markers, i.e. ATPS? and SRP54. Our analysis showed that phylogenetic trees based on (macroscopical) morphological properties and phylogenetic trees based on DNA markers ATPS? and SRP54 are partially similar indicating that morphological characteristics at the colony level provide another axis, in addition to commonly used features such as corallite morphology and ecological information, to delineate genetically different coral species. We discuss this new method that allows systematic quantitative comparison between morphological characteristics of entire colonies and genetic data.

| S-EPMC3743869 | biostudies-literature

jaMadSena

Project description:Madracis senaria (six ray star coral)

| PRJEB82185 | ENA