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Staphylococcus aureus strain:USA300 LAC

ABSTRACT: Staphylococcus aureus strain:USA300 LAC Transcriptome or Gene expression

PROVIDER: PRJNA1199784 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR31798041_1.fastq.gz	Fastqsanger.gz
	SRR31798041_2.fastq.gz	Fastqsanger.gz
	SRR31798042_1.fastq.gz	Fastqsanger.gz
	SRR31798042_2.fastq.gz	Fastqsanger.gz
	SRR31798043_1.fastq.gz	Fastqsanger.gz

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Expression analysis of Staphylococcus aureus USA300 LAC in response to vehicle and benzbromarone.

Project description:Compilation fo whole genome gene expression changes in Staphylococcus aureus USA300 LAC cultures grown in the presence of vehicle or the anti-gout drug benzbromarone. The drug was intially screened as effective against the agr quorum sensing system in Staphylococcus aureus AH1677. A microarray study using total RNA harvested from three cultures of Staphylococcus aureus USA300 LAC plus vehicle control and three cultures of Staphylococcus aureus USA300 LAC plus 12 uM benzbromarone.

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Expression analysis of Staphylococcus aureus USA300 LAC in response to vehicle and benzbromarone.

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Regulation of gene expression by MgrA in Staphylococcus aureus USA300 strain LAC

Project description:MgrA is a global regulator of gene expression in Staphylococcus aureus. Here we use RNA-sequencing to compare gene expression in a wild-type USA300 strain and an isogenic mgrA mutant.

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Regulation of gene expression by ArlRS in Staphylococcus aureus USA300 strain LAC

Project description:ArlRS is a two-component regulatory system in Staphylococcus aureus. Here we use RNA-sequencing to compare gene expression in a wild-type USA300 strain and an isogenic arlRS mutant.

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Staphylococcus aureus strain:USA300 LAC

Project description:Staphylococcus aureus strain:USA300 LAC Transcriptome or Gene expression

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Expression from Staphylococcus aureus strain USA300-lac during low and 2M NaCl exposure

Project description:S. aureus has the propensity to survive a range of NaCl challenge conditions We used commercially available Affymetrix S. aureus GeneChips (part number 900514) to compare the gene expression properties of wild type cells during growth at no or high (2M) NaCl. S. aureus strain USA300-lac cells were grown to late exponential phase growth in the absence or presence of 2M NaCl, total bacterial RNA was isolated and subjected to GeneChip hybridization and analysis. We sought to determine the regulatory effects of high NaCl.

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RNA-seq of Wildtype Staphylococcus aureus USA300 NRS384

Project description:Methicillin-resistant Staphylococcus aureus (MRSA) infections result in more than 200,000 hospitalizations and 10,000 deaths in the United States each year and remain an important medical challenge. To better understand the transcriptome of Staphylococcus aureus USA300 NRS384, a community-acquired MRSA strain, we have conducted an RNA-Seq experiment on WT samples.

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Staphylococcus aureus strain:USA300 LAC

Project description:RNA-seq of Staphylococcus aureus USA300 LAC cultures with or without CDDO

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Staphylococcus aureus strain:USA300 LAC

Project description:RNA-seq of Staphylococcus aureus USA300 LAC cultures with or without CDDO

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Linoleic Acid Stimulation of WT Staphylococcus aureus USA300 NRS384

Project description:Methicillin-resistant Staphylococcus aureus (MRSA) infections result in more than 200,000 hospitalizations and 10,000 deaths in the United States each year and remain an important medical challenge. A key factor of S. aureus pathogenesis is the production of virulence proteins that are secreted into the extracellular matrix damaging host tissues and forming abscesses that may serve as replicative niches for the bacteria. We recently discovered that host-derived cis-unsaturated fatty acids activate the transcription and translation of EsxA, a protein that plays a central role in abscess formation in clinically relevant MRSA strains. Additionally, we discovered that fatty acid stimulation of EsxA is dependent on fakA, a gene that encodes a protein responsible for the incorporation of exogenous fatty acids into the S. aureus phospholipid membrane. In order to gain a comprehensive understanding of host-fatty-acid-sensing in S. aureus, we performed RNA-Seq analysis on WT Staphylococcus aureus USA300 NRS384, a community-acquired MRSA strain, in the presence and absence of 10μM linoleic acid.

2017-11-15 | GSE101580 | GEO

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