Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Molecular Mechanisms of Cold Stress Response in Trifolium ambiguum

PROVIDER: PRJNA1203358 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31837145_1.fastq.gz	Fastqsanger.gz
	SRR31837145_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:Trifolium ambiguum

| PRJNA1232370 | ENA

Trifolium ambiguum

Project description:Trifolium ambiguum overview

| PRJNA1442923 | ENA

Trifolium ambiguum cultivar:PI 643168

Project description:Trifolium ambiguum PI 643168 Resequencing

| PRJNA1401247 | ENA

Transcriptomic responses to cold stress in cold-semi-sensitive and cold-tolerant strawberry varieties

Project description:This study investigates the molecular mechanisms of cold stress tolerance in two strawberry cultivars: ‘Queen Elisa,’ a highly cold-tolerant variety, and ‘Camarosa,’ a semi-sensitive variety. Using RNA-Seq analysis, we identified key genes and pathways involved in the cold stress response, providing insights into the genetic and molecular basis of cold tolerance in strawberries. These findings highlight potential targets for improving crop resilience to abiotic stress.

2025-11-19 | E-MTAB-14796 | biostudies-arrayexpress

Enzymatic Methyl sequencing (EM-seq) of primed and non-primed Arabidopsis thaliana under cold-stress

Project description:Plants have developed various mechanisms of stress response, including stress memory. Epigenetic mechanisms play a vital role in plants' stress memory. In this experiment, DNA methylation dynamics in primed and non-primed A. thaliana plants was evaluated under cold stress to understand the role of epigenetic mechanisms in cold stress responses and memory.

2026-03-13 | E-MTAB-16110 | biostudies-arrayexpress

Trifolium ambiguum

Project description:Trifolium ambiguum Transcriptome or Gene expression

| PRJNA586585 | ENA

Expression data from cold stress in Sanhe cattle

2016-04-02 | GSE79827 | GEO

Transcriptome profile of microRNAs associated with cold tolerance in Dermacentor silvarum ticks

Project description:We identified and functionally explored D. silvarum miRNAs involved in cold response to gain further understanding of the molecular regulatory mechanisms underlying the cold stress in ticks. The microRNA libraries of D. silvarum were established via high-throughput sequencing after exposure to different cold treatments. A total of 147 miRNAs, including 44 known miRNAs and 103 new miRNAs, were identified.

2021-09-29 | GSE184617 | GEO

Larvae of Drosophila melanogaster exhibit transcriptional activation of immune response pathways and antimicrobial peptides during recovery from supercooling stress

Project description:The biochemical and molecular mechanisms of insect cold acclimation prior to cold stress have been relatively well explored. The mechanisms linked to recovery and repair after cold stress received much less attention.Here we focus on recovery from cold stress in the larvae of vinegar fly (Drosophila melanogaster) that were exposed to two physiologically distinct cold stress situations; supercooling (S, survival > 90%) and freezing (F, survival < 10%), both at -5°C.The transcriptomic responses to cold stress were analyzed.

2019-01-25 | E-MTAB-7401 | biostudies-arrayexpress

Expression data from cold stress in Sanhe cattle

Project description:While cold stress has been shown to seriously impact cattle industry, there are only a few reports investigating the effect of cold stress on cattle. Whether severe cold stress results in alterations in gene expression and affects molecular genetic mechanisms remains unknown. We used microarrays to analyze the alterations in gene expression in peripheral blood samples in response to cold exposure and identified differentially regulated genes. This study was performed on 30 healthy Sanhe heifers with similar genetic backgrounds, weight, and age. In order to induce cold stress, the cattle were transferred outdoor and were exposed to a temperature of -32Â°C for 3 hours followed by housing in cowshed at 5Â°C for 15 hours. Blood samples with EDTA were collected from each animal before and after the cold exposure. After total RNA was isolated from blood cells, six RNA samples (three derived before and three after the cold exposure), were collected from three animals randomly selected from the 30 healthy heifers for gene expression profiling in response to severe cold stress.

2016-04-02 | E-GEOD-79827 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data