Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Indocalamus tessellatus isolate:XH-2025

ABSTRACT: Indocalamus tessellatus isolate:XH-2025 Genome sequencing

PROVIDER: PRJNA1215803 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR32130617_1.fastq.gz	Fastqsanger.gz
	SRR32130617_2.fastq.gz	Fastqsanger.gz
	SRR32130618_1.fastq.gz	Fastqsanger.gz
	SRR32130618_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 39

Similar Datasets

Lagenaria siceraria isolate:XH-2024

Project description:Lagenaria siceraria isolate:XH-2024 Genome sequencing

| PRJNA1196720 | ENA

Liparis tessellatus isolate:Republic of Korea/uljin

Project description:Liparis tessellatus isolate:Republic of Korea/uljin Genome sequencing

| PRJNA548028 | ENA

Liparis tessellatus

Project description:Liparis tessellatus Genome sequencing and assembly

| PRJNA562742 | ENA

Liparis tessellatus

Project description:Liparis tessellatus overview

| PRJNA562762 | ENA

XH lncRNA tend to participate in transcriptional or development regulations as their coding neighbors

Project description:We report that head to head long noncoding RNAs contribute to transcription and developmental process. Thousands of lncRNAs have been identified in the whole genome, and classified to several subgroups based on the genome position with their coding neighbors. XH, the head to head subgroup is associated with transcription and development in GO analysis. Here, we knockdown serveral XH lncRNA by shRNA in embryonic stem cells and induce nondirectional differentiation by removing LIF or neural differentiation by RA. Knockdown of XH lncRNAs led to uniform downregulation of nearby coding genes, and form regulatory circuits with its nearby coding genes to fine-tune embryonic lineage development. We propose that XH lncRNA may function primarily as 'cis-regulators' of the expression of nearby protein-coding genes, and tend to participate in transcriptional or development regulations as their coding neighbors.

2016-10-31 | GSE62899 | GEO

Aeromonas sp. XH

Project description:Aeromonas sp. XH Genome sequencing

| PRJNA1029364 | ENA

Miniopterus fuliginosus isolate:PC-2025

Project description:Miniopterus fuliginosus isolate:PC-2025 Genome sequencing

| PRJNA1230585 | ENA

Solen grandis isolate:ZZ-2025

Project description:Solen grandis isolate:ZZ-2025 Genome sequencing

| PRJNA1258377 | ENA

Ctenopharyngodon idella isolate:PM-2025

Project description:Ctenopharyngodon idella isolate:PM-2025 Genome sequencing