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Study of the effect of the trancription factor SARO_RS14285 in aromatics degradation in Novosphingobium aromaticivorans

ABSTRACT: Study of the effect of the trancription factor SARO_RS14285 in aromatics degradation in Novosphingobium aromaticivorans

PROVIDER: PRJNA1226177 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR32414965_1.fastq.gz	Fastqsanger.gz
	SRR32414965_2.fastq.gz	Fastqsanger.gz
	SRR32414966_1.fastq.gz	Fastqsanger.gz
	SRR32414966_2.fastq.gz	Fastqsanger.gz
	SRR32414967_1.fastq.gz	Fastqsanger.gz

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Study of the effect of the trancription factor SARO_RS14285 in aromatics degradation in Novosphingobium aromaticivorans

Project description:Novosphingobium aromaticivorans DSM12444 is a bacterium capable of catabolizing several lignin aromatics. A main degradation pathway for these compounds is the protocatechuate (PCA) meta-cleavage. Nevertheless, the transcriptional regulation of this pathway is still unknown. Immediately upstream of the genes encoding the enzymes for this pathway, the LysR-type transcription factor (LTTF) SARO_RS14285 was identified. To evaluate the functionality of this LTTF, a deletion mutant was constructed. A transcriptomic analysis of the mutant strain cultured in several aromatic compounds is included in this report.

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