Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Anomaloglossus baeobatrachus (rocket frog) genome, aAnoBae1

PROVIDER: PRJNA1235750 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
		Other
	SRR32746343_subreads.fastq.gz	Fastqsanger.gz
	SRR32746344_subreads.fastq.gz	Fastqsanger.gz
	SRR32746345_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Project description:Anomaloglossus baeobatrachus (rocket frog) transcriptome, aAnoBae1

| PRJNA1267151 | ENA

Project description:Anomaloglossus baeobatrachus (rocket frog) genome, aAnoBae1, sequence data

| PRJNA1237421 | ENA

Anomaloglossus baeobatrachus isolate:aAnoBae1

Project description:Anomaloglossus baeobatrachus (rocket frog) genome, aAnoBae1, haplotype 2

| PRJNA1226913 | ENA

Anomaloglossus baeobatrachus isolate:aAnoBae1

Project description:Anomaloglossus baeobatrachus (rocket frog) genome, aAnoBae1, haplotype 1

| PRJNA1226914 | ENA

Anomaloglossus baeobatrachus

Project description:Anomaloglossus baeobatrachus overview

| PRJNA1227624 | ENA

Anomaloglossus kaiei

Project description:Anomaloglossus kaiei

| PRJNA1169306 | ENA

Anomaloglossus beebei

Project description:Anomaloglossus beebei

| PRJNA1169595 | ENA

In vivo T-box Transcription Factor Profiling Reveals Joint Regulation of Embryonic Neuro-mesodermal Bipotency.

Project description:We defined genome-wide regulatory inputs of the T-box transcription factors Brachyury (Xbra), Eomesodermin (Eomes) and VegT that maintain neuro-mesodermal stem cells and determine their bipotential fates in the Xenopus tropicalis frog embryo.

2013-09-19 | GSE48560 | GEO

Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs

Project description:Frogs are an ecologically diverse and phylogenetically ancient group of anuran amphibians that include important vertebrate cell and developmental model systems, notably the genus Xenopus. Here we report a high-quality reference genome sequence for the western clawed frog, Xenopus tropicalis, along with draft chromosome-scale sequences of three distantly related emerging model frog species, Eleutherodactylus coqui, Engystomops pustulosus and Hymenochirus boettgeri. Frog chromosomes have remained remarkably stable since the Mesozoic Era, with limited Robertsonian (i.e., centric) translocations and end-to-end fusions found among the smaller chromosomes. Conservation of synteny includes conservation of centromere locations, marked by centromeric tandem repeats associated with Cenp-a binding, surrounded by pericentromeric LINE/L1 elements. We explored chromosome structure across frogs, using a dense meiotic linkage map for X. tropicalis and chromatin conformation capture (Hi-C) data for all species. Abundant satellite repeats occupy the unusually long (~20 megabase) terminal regions of each chromosome that coincide with high rates of recombination. Both embryonic and differentiated cells show reproducible association of centromeric chromatin, and of telomeres, reflecting a Rabl-like configuration. Our comparative analyses reveal 13 conserved ancestral anuran chromosomes from which contemporary frog genomes were constructed.

2022-03-30 | GSE199671 | GEO

In vivo T-box Transcription Factor Profiling Reveals Joint Regulation of Embryonic Neuro-mesodermal Bipotency.

2013-09-19 | E-GEOD-48560 | biostudies-arrayexpress