Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: eDNA Metabarcoding Assessment of Vertebrate Biodiversity in the Sea of Okhotsk Using the 12S rRNA Gene Marker

PROVIDER: PRJNA1238853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32791440_1.fastq.gz	Fastqsanger.gz
	SRR32791441_1.fastq.gz	Fastqsanger.gz
	SRR32791442_1.fastq.gz	Fastqsanger.gz
	SRR32791443_1.fastq.gz	Fastqsanger.gz
	SRR32791444_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Project description:eDNA Metabarcoding Assessment of Vertebrate Biodiversity in The River Svir Using COI and 12S rRNA Gene Markers

| PRJNA1261048 | ENA

Project description:eDNA Metabarcoding Assessment of Vertebrate Biodiversity in The Coastal Areas of The Pechora and Kara Seas Using COI and 12S rRNA Gene Markers

| PRJNA1261075 | ENA

Project description:Airborne DNA (air eDNA) 12S vertebrate metabarcoding sequencing

| PRJNA1175642 | ENA

Project description:Biodiversity assessment of coastal lagoon through eDNA metabarcoding

| PRJNA549294 | ENA

freshwater metagenome

Project description:Freshwater eDNA 12S quantitative metabarcoding

| PRJDB13102 | ENA

Towards functional profiling for eDNA based monitoring in coastal environments: a comparison of three approaches

Project description:Monitoring microbial communities can aid in understanding the state of these habitats. Environmental DNA (eDNA) techniques provide efficient and comprehensive monitoring by capturing broader diversity. Besides structural profiling, eDNA methods allow the study of functional profiles, encompassing the genes within the microbial community. In this study, three methodologies were compared for functional profiling of microbial communities in estuarine and coastal sites in the Bay of Biscay. The methodologies included inference from 16S metabarcoding data using Tax4Fun, GeoChip microarrays, and shotgun metagenomics.

2024-04-14 | E-MTAB-13075 | biostudies-arrayexpress

Mitochondrial 12S hypermethylation in HeLa cells and A1555G cybrids

Project description:This dataset investigates the transcriptional effect of mitochondrial 12S rRNA hypermethylation, both by overexpressing the mitochondrial methyltransferase mtTFB1 in HeLa cells and by using A1555G cybrids, where the 12S rRNA is hypermethylated. HeLa cells overexpressing a methyltransferase-deficient mtTFB1 (mtTFB1[G65A]) and wild-type A1555A cybrids were used as controls. four samples with 12S rRNA hypermethylation (two cell lines, with two biological replicates each) versus four samples with basal 12S rRNA methylation (two cell lines, with two biological replicates each)

2012-09-18 | E-GEOD-33780 | biostudies-arrayexpress

Marine aquatic vertebrate eDNA 12S amplicon

Project description:Marine aquatic vertebrate eDNA 12S amplicon Metagenome

| PRJNA864636 | ENA

Project description:12S metabarcoding of eDNA from rivers

| PRJNA1241752 | ENA

Mitochondrial 12S hypermethylation in HeLa cells and A1555G cybrids

2012-09-18 | GSE33780 | GEO