Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptome analysis of ZYMV infective clones carrying eGFP

PROVIDER: PRJNA1245619 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR33004583_1.fastq.gz	Fastqsanger.gz
	SRR33004583_2.fastq.gz	Fastqsanger.gz
	SRR33004584_1.fastq.gz	Fastqsanger.gz
	SRR33004584_2.fastq.gz	Fastqsanger.gz
	SRR33004585_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Transcriptome analysis of two life cycle stages of Trypanosoma brucei gambiense

Project description:Trypanosoma brucei gambiense is the causative agent of the fatal human disease African sleeping sickness. Here we have compared the transcriptome of two different life cycle stages, the potentially human-infective bloodstream form and the non-human-infective procyclic stage, using digital gene expression (DGE) analysis.

2010-07-22 | GSE18065 | GEO

Analysis of pvalb-egfp cells from mouse visual cortex.

Project description:We provide an annotated cDNA clone collection which is particularly suitable for transcriptomic analysis in the mouse brain. Using it on microarrays, we compared the transcriptome of EGFP positive and negative cells in a parvalbumin-egfp transgenic background and showed that more than 30 % of clones are differentially expressed. Our clone collection will be a useful resource for the study of the transcriptome of single cell types. Keywords: Cell type comparison Comparison between fluorescent and non-fluorescent cells isolated from the visual cortex of parvalbumin-egfp transgenic mice. Using five biological replicates with a dye-swap strategy (10 hybridisations).

2008-08-22 | E-GEOD-8968 | biostudies-arrayexpress

Analysis of pvalb-egfp cells from mouse visual cortex.

2008-08-22 | GSE8968 | GEO

β-glucan alleviates infective intestinal inflammation via activating Th17 cells in a teleost fish

Project description:We established a bacteria infective intestinal inflammation in turbot (Scophthalmus maximus). And found that β-glucan could significantly alleviate the phenotype of turbot intestinal inflammation. We performed single cell transcriptome analysis to study bacteria infective intestinal inflammation and the effects of β-glucan. Furthermore, we revealed that β-glucan through activates Th17 cells to alleviate intestinal inflammation in turbot.

2023-12-31 | GSE238068 | GEO

Tobacco etch virus strain:TEV-eGFP

Project description:Experimental evolution of Tobacco etch virus carrying eGFP

| PRJNA321664 | ENA

Gene expression analysis in fly ovaries carrying Sco homozgyous clones

Project description:Gene expression analysis in fly ovaries carrying Sco homozgyous clones

| PRJNA417023 | ENA

Transcriptome analysis of Mapt-EGFP+ and Mapt-EGFP- myenteric cells

Project description:Transcriptome analysis of Mapt-EGFP+ and Mapt-EGFP- myenteric cells

| PRJNA822404 | ENA

Effect of benzimidazole derivative C162 on Staphylococcus aureus virulence

Project description:From a Caenorhabditis elegans - S. aureus anti-infective screen, we identified benzimidazole derivative C162 as one of the potential anti-infective candidate that rescued the infected-nematodes from infection. This compound was found to exhibit anti-biofilm activity against S. aureus. To investigate the transcriptome profile of S. aureus in response to benzimidazole derivative C162, a genome-wide transcriptome analysis was performed on C162-treated S. aureus using the Affymetrix GeneChip S. aureus Genome Arrays. Our main interest is to look at the expression profiles of the biofilm-associated and virulence genes.

2018-02-13 | GSE84485 | GEO

The PR/SET domain Zinc finger protein Prdm4 regulates gene expression in ES cells but plays a non-essential role in the developing mouse embryo.

Project description:ChIP-seq using anti-GFP antibody to map genomic binding of Prdm4-EGFP in stably transfected mouse embryonic stem cells Two independent ChIP-seq replicates for each of two independent Prdm4-EGFP expressing ES cell clones resulting in four anti-GFP ChIP-seq experiments. These samples have paired mouse IgG control.

2013-08-08 | E-GEOD-48372 | biostudies-arrayexpress

Transcriptome analysis of HT1080 cells expressing HA-hZFAT-EGFP and EGFP

Project description:Transcriptome analysis of HT1080 cells expressing HA-hZFAT-EGFP and EGFP

| PRJNA607801 | ENA